RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ELMSAN1Q6PJG2 1045 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 PIK3AP1Q6ZUJ8 805 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 GRASPQ7Z6J2 395 aaPredicted RBP26.06■■□□□ 1.76
MMP28-203ENST00000612672 ZSWIM4Q9H7M6 989 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.06■■□□□ 1.76
MMP28-203ENST00000612672 FBXW11Q9UKB1 542 aa26.06■■□□□ 1.76
MMP28-203ENST00000612672 EPG5Q9HCE0 2579 aa26.05■■□□□ 1.76
MMP28-203ENST00000612672 A0A087WWV3 80 aa26.05■■□□□ 1.76
MMP28-203ENST00000612672 ADAM12O43184 909 aa26.05■■□□□ 1.76
MMP28-203ENST00000612672 GCFC2P16383 781 aaKnown RBP26.05■■□□□ 1.76
MMP28-203ENST00000612672 ARL2P36404 184 aa26.05■■□□□ 1.76
MMP28-203ENST00000612672 TPH2Q8IWU9 490 aa26.05■■□□□ 1.76
MMP28-203ENST00000612672 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.05■■□□□ 1.76
MMP28-203ENST00000612672 TTLL13PA6NNM8 815 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 TBX3O15119 743 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 C1RP00736 705 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 FSHRP23945 695 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 STARD6P59095 220 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 GRIK3Q13003 919 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 MXD4Q14582 209 aaPredicted RBP26.04■■□□□ 1.76
MMP28-203ENST00000612672 OTUD6AQ7L8S5 288 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 FAM177A1Q8N128 213 aaPredicted RBP26.04■■□□□ 1.76
MMP28-203ENST00000612672 SUMF1Q8NBK3 374 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 CLSTN3Q9BQT9 956 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 MTF2Q9Y483 593 aaPredicted RBP26.04■■□□□ 1.76
MMP28-203ENST00000612672 TRIP11Q15643 1979 aa26.04■■□□□ 1.76
MMP28-203ENST00000612672 IGFBP6P24592 240 aaPredicted RBP26.03■■□□□ 1.76
MMP28-203ENST00000612672 SCRN1Q12765 414 aa26.03■■□□□ 1.76
MMP28-203ENST00000612672 PCBP1Q15365 356 aaKnown RBP eCLIP26.03■■□□□ 1.76
MMP28-203ENST00000612672 DGLUCYQ7Z3D6 616 aa26.03■■□□□ 1.76
MMP28-203ENST00000612672 GPR65Q8IYL9 337 aa26.03■■□□□ 1.76
MMP28-203ENST00000612672 EIF2AK1Q9BQI3 630 aaKnown RBP26.03■■□□□ 1.76
MMP28-203ENST00000612672 TRIM6Q9C030 488 aaPredicted RBP26.03■■□□□ 1.76
MMP28-203ENST00000612672 CASTOR2A6NHX0 329 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 WNT7AO00755 349 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 KIF4AO95239 1232 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 POU5F1BQ06416 359 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 SNW1Q13573 536 aaKnown RBP26.02■■□□□ 1.76
MMP28-203ENST00000612672 HSP90AA2PQ14568 343 aaPredicted RBP26.02■■□□□ 1.76
MMP28-203ENST00000612672 SLC27A1Q6PCB7 646 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 ITFG1Q8TB96 612 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 PARP2Q9UGN5 583 aa26.02■■□□□ 1.76
MMP28-203ENST00000612672 KMT2BQ9UMN6 2715 aaPredicted RBP26.02■■□□□ 1.76
MMP28-203ENST00000612672 PTGESO14684 152 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 CCL16O15467 120 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 NR1I2O75469 434 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 NR5A1Q13285 461 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 TFDP1Q14186 410 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 NAB2Q15742 525 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 POTEHQ6S545 545 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 LNX1Q8TBB1 728 aaPredicted RBP26.01■■□□□ 1.75
MMP28-203ENST00000612672 HSD17B14Q9BPX1 270 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 HINFPQ9BQA5 517 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 DDX23Q9BUQ8 820 aaKnown RBP26.01■■□□□ 1.75
MMP28-203ENST00000612672 NFKBIZQ9BYH8 718 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 POLR3FQ9H1D9 316 aaPredicted RBP26.01■■□□□ 1.75
MMP28-203ENST00000612672 GPRC5CQ9NQ84 441 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 CDH7Q9ULB5 785 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 CYP46A1Q9Y6A2 500 aa26.01■■□□□ 1.75
MMP28-203ENST00000612672 ZMYM2Q9UBW7 1377 aa26■■□□□ 1.75
MMP28-203ENST00000612672 A0A1B0GUA9 196 aa26■■□□□ 1.75
MMP28-203ENST00000612672 TADA2AO75478 443 aa26■■□□□ 1.75
MMP28-203ENST00000612672 EDN1P05305 212 aa26■■□□□ 1.75
MMP28-203ENST00000612672 RARRES1P49788 294 aa26■■□□□ 1.75
MMP28-203ENST00000612672 RUBCNQ92622 972 aa26■■□□□ 1.75
MMP28-203ENST00000612672 FGF13Q92913 245 aa26■■□□□ 1.75
MMP28-203ENST00000612672 TNFRSF25Q93038 417 aa26■■□□□ 1.75
MMP28-203ENST00000612672 HCFC1R1Q9NWW0 138 aa26■■□□□ 1.75
MMP28-203ENST00000612672 USP20Q9Y2K6 914 aa26■■□□□ 1.75
MMP28-203ENST00000612672 ZFHX4Q86UP3 3567 aa26■■□□□ 1.75
MMP28-203ENST00000612672 CACNA1BQ00975 2339 aa26■■□□□ 1.75
MMP28-203ENST00000612672 SF3B1O75533 1304 aaKnown RBP eCLIP25.99■■□□□ 1.75
MMP28-203ENST00000612672 LYPLA2O95372 231 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 CTDNEP1O95476 244 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 C8AP07357 584 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 PSMD5Q16401 504 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 ZC3H14Q6PJT7 736 aaKnown RBP25.99■■□□□ 1.75
MMP28-203ENST00000612672 PIGOQ8TEQ8 1089 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 PIK3R5Q8WYR1 880 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 DLL3Q9NYJ7 618 aa25.99■■□□□ 1.75
MMP28-203ENST00000612672 TPRP12270 2363 aaKnown RBP25.98■■□□□ 1.75
MMP28-203ENST00000612672 STK36Q9NRP7 1315 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 MARCH6O60337 910 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 DGAT1O75907 488 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 CD72P21854 359 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 CREMQ03060 361 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 TUSC3Q13454 348 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 FAM171A1Q5VUB5 890 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 KXD1Q9BQD3 176 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 TTPALQ9BTX7 342 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 ANKEF1Q9NU02 776 aa25.98■■□□□ 1.75
MMP28-203ENST00000612672 COL4A2P08572 1712 aa25.97■■□□□ 1.75
MMP28-203ENST00000612672 KANSL1LA0AUZ9 987 aa25.97■■□□□ 1.75
MMP28-203ENST00000612672 USO1O60763 962 aaKnown RBP25.97■■□□□ 1.75
MMP28-203ENST00000612672 NCBP1Q09161 790 aaKnown RBP25.97■■□□□ 1.75
MMP28-203ENST00000612672 MLF2Q15773 248 aaPredicted RBP25.97■■□□□ 1.75
MMP28-203ENST00000612672 CPLX2Q6PUV4 134 aaKnown RBP25.97■■□□□ 1.75
MMP28-203ENST00000612672 RSPO2Q6UXX9 243 aaPredicted RBP25.97■■□□□ 1.75
MMP28-203ENST00000612672 CEP57Q86XR8 500 aa25.97■■□□□ 1.75
MMP28-203ENST00000612672 HACE1Q8IYU2 909 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms