RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 EPB41P11171 864 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 CST9Q5W186 159 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 CAPRIN2Q6IMN6 1127 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 GLG1Q92896 1179 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ATP6V1G3Q96LB4 118 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 RABGAP1Q9Y3P9 1069 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 BUB1BO60566 1050 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 FAM13AO94988 1023 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 H2AFZP0C0S5 128 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ALOX15P16050 662 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ECHS1P30084 290 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 EPHA7Q15375 998 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 CBWD6Q4V339 395 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 CBWD3Q5JTY5 395 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 CBWD5Q5RIA9 395 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 UBAP2Q5T6F2 1119 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 H2AFVQ71UI9 128 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 LNX1Q8TBB1 728 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 MDM1Q8TC05 714 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ARHGEF26Q96DR7 871 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 SH3GL1Q99961 368 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZNF408Q9H9D4 720 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 QPCTLQ9NXS2 382 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 PITPNM2Q9BZ72 1349 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ECE2O60344 883 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 FLOT1O75955 427 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 KIAA0754O94854 1291 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 GH2P01242 217 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 SREBF1P36956 1147 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 MIS18BP1Q6P0N0 1132 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 FAM117BQ6P1L5 589 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 TMEM179Q6ZVK1 233 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 FBXO11Q86XK2 927 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZMAT5Q9UDW3 170 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 DDX20Q9UHI6 824 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 A0A1W2PRG0 241 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 PPP1R37O75864 691 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 KRT13P13646 458 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 RPA1P27694 616 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 KRT71Q3SY84 523 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 SYDE2Q5VT97 1194 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 CPNE8Q86YQ8 564 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 SYT2Q8N9I0 419 aaPredicted RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 LRRC57Q8N9N7 239 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZNF473Q8WTR7 871 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 CCT8L2Q96SF2 557 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 TDRD3Q9H7E2 651 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ATP6V0A4Q9HBG4 840 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 VAV3Q9UKW4 847 aa11.47□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 TGFB1I1O43294 461 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 DRAP1Q14919 205 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 EPM2AIP1Q7L775 607 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 GMCL1P1Q8NEA9 526 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 SLC35G2Q8TBE7 412 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZFAND2BQ8WV99 257 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 HOOK2Q96ED9 719 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 GMCL1Q96IK5 515 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 MPP4Q96JB8 637 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 IGSF5Q9NSI5 407 aa11.46□□□□□ -0.57
PCDHGC3-202ENST00000611950 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 MSL3P1P0C860 447 aa11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 FERP16591 822 aa11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 MARCKSL1P49006 195 aa11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 MAGOHP61326 146 aaKnown RBP11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 MLLT1Q03111 559 aaPredicted RBP11.46□□□□□ -0.58
PCDHGC3-202ENST00000611950 ZNF844Q08AG5 666 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms