RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 ENOX2Q16206 610 aaKnown RBP13.14□□□□□ -0.31
CLK4-215ENST00000611733 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
CLK4-215ENST00000611733 IKBKBO14920 756 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 CXCL8P10145 99 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 FAM189BP81408 668 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 SPAG1Q07617 926 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 SNRNP35Q16560 246 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 DCAF4L1Q3SXM0 396 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 FOXR2Q6PJQ5 311 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 RPUSD2Q8IZ73 545 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 APBB2Q92870 758 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 BORCS6Q96GS4 357 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■□□ 15
CLK4-215ENST00000611733 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 BECN2A8MW95 431 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 GRM5P41594 1212 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 DLG4P78352 724 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 IKBKEQ14164 716 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 CDKAL1Q5VV42 579 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 ZNF598Q86UK7 904 aaKnown RBP13.13□□□□□ -0.31
CLK4-215ENST00000611733 FAM186BQ8IYM0 893 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 TRAIPQ9BWF2 469 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 PDE11AQ9HCR9 933 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
CLK4-215ENST00000611733 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 ZNF623O75123 536 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 RECQL4O94761 1208 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
CLK4-215ENST00000611733 MAGEA10P43363 369 aaPredicted RBP13.12□□□□□ -0.31
CLK4-215ENST00000611733 DEFB103AP81534 67 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.313e-11■■□□□ 12.2
CLK4-215ENST00000611733 LMBRD2Q68DH5 695 aaPredicted RBP13.12□□□□□ -0.31
CLK4-215ENST00000611733 CRIPAKQ8N1N5 446 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
CLK4-215ENST00000611733 FRMD4BQ9Y2L6 1034 aa13.12□□□□□ -0.31
CLK4-215ENST00000611733 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 CAVIN2O95810 425 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 FGBP02675 491 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 CLTAP09496 248 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 FGFR1P11362 822 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 ZNF18P17022 549 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 GATMP50440 423 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 CYP24A1Q07973 514 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 CNOT6LQ96LI5 555 aaKnown RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 H0YGN5 161 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 UPP2O95045 317 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 ITGA4P13612 1032 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 RGS19P49795 217 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
CLK4-215ENST00000611733 ZMAT2Q96NC0 199 aaKnown RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
CLK4-215ENST00000611733 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 TTC26A0AVF1 554 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
CLK4-215ENST00000611733 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
CLK4-215ENST00000611733 WDR5P61964 334 aaKnown RBP13.1□□□□□ -0.31
CLK4-215ENST00000611733 KCNJ12Q14500 433 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 TCP11X2Q5H9J9 407 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 GLRA4Q5JXX5 417 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 BRSK2Q8IWQ3 736 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 PARD3BQ8TEW8 1205 aa13.1□□□□□ -0.31
CLK4-215ENST00000611733 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms