RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LMO3Q8TAP4 145 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 NACC1Q96RE7 527 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 POLR3CQ9BUI4 534 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-216ENST00000610401 TMEM117Q9H0C3 514 aa21.85■■□□□ 1.09
SSBP3-216ENST00000610401 AGTP01019 485 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 ADRB2P07550 413 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 CD58P19256 250 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 CEP55Q53EZ4 464 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 MIER3Q7Z3K6 550 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 FITM2Q8N6M3 262 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 EIF1ADQ8N9N8 165 aaKnown RBP21.84■■□□□ 1.09
SSBP3-216ENST00000610401 TMX4Q9H1E5 349 aaPredicted RBP21.84■■□□□ 1.09
SSBP3-216ENST00000610401 PSMD10O75832 226 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 MYCLP12524 364 aaPredicted RBP21.84■■□□□ 1.09
SSBP3-216ENST00000610401 RASA3Q14644 834 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 SYCP2LQ5T4T6 812 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 ERICH1Q86X53 443 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 IL31RAQ8NI17 732 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 AGBL1Q96MI9 1066 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 SYT11Q9BT88 431 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 GLT8D2Q9H1C3 349 aa21.84■■□□□ 1.09
SSBP3-216ENST00000610401 GTPBP10A4D1E9 387 aaKnown RBP21.83■■□□□ 1.09
SSBP3-216ENST00000610401 FOSP01100 380 aaPredicted RBP21.83■■□□□ 1.09
SSBP3-216ENST00000610401 MAPK4P31152 587 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 RWDD2BP57060 319 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 PIGWQ7Z7B1 504 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 C4orf33Q8N1A6 199 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 TAS1R2Q8TE23 839 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 MBOAT7Q96N66 472 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 NSRP1Q9H0G5 558 aaKnown RBP21.83■■□□□ 1.09
SSBP3-216ENST00000610401 HOMER3Q9NSC5 361 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 TCEAL9Q9UHQ7 104 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 USP15Q9Y4E8 981 aaPredicted RBP21.83■■□□□ 1.09
SSBP3-216ENST00000610401 MGRN1O60291 552 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 ZSCAN5DPP0CG00 497 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 DNAJC3Q13217 504 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 C10orf88Q9H8K7 445 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 ALG13Q9NP73 1137 aaKnown RBP21.83■■□□□ 1.09
SSBP3-216ENST00000610401 SLCO1B3Q9NPD5 702 aa21.83■■□□□ 1.09
SSBP3-216ENST00000610401 PODXLO00592 558 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 PDE6CP51160 858 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 NCALDP61601 193 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 STXBP4Q6ZWJ1 553 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 ARMC9Q7Z3E5 817 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 PLCD4Q9BRC7 762 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 C12orf65Q9H3J6 166 aaKnown RBP21.83■■□□□ 1.08
SSBP3-216ENST00000610401 AAASQ9NRG9 546 aa21.83■■□□□ 1.08
SSBP3-216ENST00000610401 PLIN4Q96Q06 1357 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 BHMG1C9JSJ3 638 aaPredicted RBP21.82■■□□□ 1.08
SSBP3-216ENST00000610401 RTN2O75298 545 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 RARGP13631 454 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 ATP13A4Q4VNC1 1196 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 MICAL1Q8TDZ2 1067 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 POMGNT1Q8WZA1 660 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 NYAP2Q9P242 653 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 GGA2Q9UJY4 613 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 USP21Q9UK80 565 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 TBX3O15119 743 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 FMO1Q01740 532 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 LACTB2Q53H82 288 aaPredicted RBP21.82■■□□□ 1.08
SSBP3-216ENST00000610401 TMEM179Q6ZVK1 233 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 ANAPC5Q9UJX4 755 aa21.82■■□□□ 1.08
SSBP3-216ENST00000610401 BANF1O75531 89 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 KIF22Q14807 665 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 PPP2R5AQ15172 486 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 SPOPLQ6IQ16 392 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 VSTM1Q6UX27 236 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 HAUS6Q7Z4H7 955 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 PRMT6Q96LA8 375 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.81■■□□□ 1.081e-6■■■■■ 31.8
SSBP3-216ENST00000610401 ETNK1Q9HBU6 452 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 MYH11P35749 1972 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 EIF3DO15371 548 aaKnown RBP eCLIP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 CFHP08603 1231 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 KRT10P13645 584 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 ETS1P14921 441 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 NQO1P15559 274 aaKnown RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 EIF2AK2P19525 551 aaKnown RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 C15orf52Q6ZUT6 534 aaKnown RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 LARSQ9P2J5 1176 aaKnown RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 COL16A1Q07092 1604 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 FRMPD4Q14CM0 1322 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 DNAJC8O75937 253 aaPredicted RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 SUN1O94901 812 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 CYP11B1P15538 503 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 RRM1P23921 792 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 YY1P25490 414 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 TARSP26639 723 aaKnown RBP21.81■■□□□ 1.08
SSBP3-216ENST00000610401 SLC8A1P32418 973 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 XXYLT1Q8NBI6 393 aa21.81■■□□□ 1.08
SSBP3-216ENST00000610401 ARFGEF1Q9Y6D6 1849 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 IFNB1P01574 187 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 RALAP11233 206 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 HARSP12081 509 aaKnown RBP21.8■■□□□ 1.08
SSBP3-216ENST00000610401 CTNNA2P26232 953 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 SLMAPQ14BN4 828 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 SPATA21Q7Z572 469 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms