RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 ITGAXP20702 1163 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 IL10P22301 178 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 ACAT1P24752 427 aaKnown RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 RPL9P32969 192 aaKnown RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SLC9A3P48764 834 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 MRPS5P82675 430 aaKnown RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 GUCY1A3Q02108 690 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 NNTQ13423 1086 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 EPHA7Q15375 998 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 LACTB2Q53H82 288 aaPredicted RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SNAP47Q5SQN1 464 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 NCAPH2Q6IBW4 605 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SARM1Q6SZW1 724 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 BEND4Q6ZU67 534 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 HS2ST1Q7LGA3 356 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 TMC7Q7Z402 723 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 TCAIMQ8N3R3 496 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 CCNYL1Q8N7R7 359 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 ANKRD42Q8N9B4 389 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 FNDC8Q8TC99 324 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 INTS12Q96CB8 462 aaKnown RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 METTL2AQ96IZ6 378 aaKnown RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 COX4I2Q96KJ9 171 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 CAPZA3Q96KX2 299 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 FAM20AQ96MK3 541 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SLC35C2Q9NQQ7 365 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 GIN1Q9NXP7 522 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 FBXO40Q9UH90 709 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 CYTH4Q9UIA0 394 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 SNX8Q9Y5X2 465 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 TACC3Q9Y6A5 838 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 MED1Q15648 1581 aaPredicted RBP5.03□□□□□ -1.6
HDDC2-208ENST00000609021 AK9Q5TCS8 1911 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 PAPPAQ13219 1627 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 LTBP4Q8N2S1 1624 aa5.03□□□□□ -1.6
HDDC2-208ENST00000609021 MAGEB16A2A368 324 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 KPNA5O15131 536 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 MAGEB3O15480 346 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TIPRLO75663 272 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ALDH2P05091 517 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 HEXBP07686 556 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 POU2F1P14859 743 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 M6PRP20645 277 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CDH3P22223 829 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PSMA4P25789 261 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PBLDP30039 288 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GNALP38405 381 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SLCO1A2P46721 670 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RXRGP48443 463 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CLK3P49761 638 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TUBP50607 506 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SCNN1DP51172 638 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GABREP78334 506 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ADAM17P78536 824 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 NFIL3Q16649 462 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ARHGAP44Q17R89 818 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ZCWPW2Q504Y3 356 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 LIN52Q52LA3 116 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 BMP2KLQ5H9B9 411 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 FAM26DQ5JW98 314 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 IL23RQ5VWK5 629 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SNRNP48Q6IEG0 339 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 MILR1Q7Z6M3 343 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ARHGAP24Q8N264 748 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 USHBP1Q8N6Y0 703 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 DTX3Q8N9I9 347 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TTC13Q8NBP0 860 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 CFAP61Q8NHU2 1237 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SLC9A6Q92581 669 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RBM18Q96H35 190 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SEC16BQ96JE7 1060 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 NIFKQ9BYG3 293 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 OSBPL7Q9BZF2 842 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 KIAA1683Q9H0B3 1180 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SMARCAD1Q9H4L7 1026 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RUBCNLQ9H714 662 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ANKZF1Q9H8Y5 726 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 FAM8A1Q9UBU6 413 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 STX8Q9UNK0 236 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 TLL2Q9Y6L7 1015 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 OR6C65A6NJZ3 312 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 ARHGAP6O43182 974 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 SSX5O60225 188 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 RASGRP1O95267 797 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 EPB41P11171 864 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PABPC1P11940 636 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 EEF2P13639 858 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 POLR2CP19387 275 aaPredicted RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 NR1D1P20393 614 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 GPR85P60893 370 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 PPP2R2BQ00005 443 aa5.02□□□□□ -1.61
HDDC2-208ENST00000609021 OTUD4Q01804 1114 aaKnown RBP5.02□□□□□ -1.61
HDDC2-208ENST00000609021 OCA2Q04671 838 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms