RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 DSC1Q08554 894 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 COL19A1Q14993 1142 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 SLC39A14Q15043 492 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 RRAGBQ5VZM2 374 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 TAS1R1Q7RTX1 841 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 GLYCTKQ8IVS8 523 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 LINC00301Q8NCQ3 95 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 TMEM161BQ8NDZ6 487 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 STAMQ92783 540 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 ZNF396Q96N95 335 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-204ENST00000608295 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 TIPINQ9BVW5 301 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 GOLGA2P5Q9HBQ8 144 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 NGRNQ9NPE2 291 aaKnown RBP15.9■□□□□ 0.14
HDDC2-204ENST00000608295 CLEC1BQ9P126 229 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 TNFSF13BQ9Y275 285 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 PDCD11Q14690 1871 aaKnown RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 TNFRSF10AO00220 468 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 TULP1O00294 542 aaPredicted RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 ALDH2P05091 517 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 MAPTP10636 758 aaKnown RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 SMTNP53814 917 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 GIT2Q14161 759 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 DDX53Q86TM3 631 aaKnown RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 TMEM130Q8N3G9 435 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 TMEM134Q9H6X4 195 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 TBC1D7Q9P0N9 293 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 LARSQ9P2J5 1176 aaKnown RBP15.89■□□□□ 0.13
HDDC2-204ENST00000608295 ODF2LQ9ULJ1 636 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 HCFC2Q9Y5Z7 792 aa15.89■□□□□ 0.13
HDDC2-204ENST00000608295 MBTPS2O43462 519 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 NCK2O43639 380 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 CLASP2O75122 1294 aaKnown RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 KIF4AO95239 1232 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 URODP06132 367 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 WEE2P0C1S8 567 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 CTSAP10619 480 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 IDEP14735 1019 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 EPCAMP16422 314 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 NCKAP1LP55160 1127 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 SMAD4Q13485 552 aaKnown RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.134e-14■■■■□ 23.8
HDDC2-204ENST00000608295 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 PDE12Q6L8Q7 609 aaKnown RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 MPZL3Q6UWV2 235 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 HAUS6Q7Z4H7 955 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 FEZF2Q8TBJ5 459 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 RSPH1Q8WYR4 309 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 IKZF4Q9H2S9 585 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 C17orf75Q9HAS0 396 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 PARVGQ9HBI0 331 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 CD320Q9NPF0 282 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 KCND2Q9NZV8 630 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
HDDC2-204ENST00000608295 VWA8A3KMH1 1905 aa15.88■□□□□ 0.13
HDDC2-204ENST00000608295 MYMKA6NI61 221 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 HNRNPDLO14979 420 aaKnown RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 INPPL1O15357 1258 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 SLC26A4O43511 780 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 NR1I2O75469 434 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 THP07101 528 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 LIG4P49917 911 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 DNM1Q05193 864 aaKnown RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 SPAG1Q07617 926 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 TUSC3Q13454 348 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 BMS1Q14692 1282 aaKnown RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 ZC2HC1CQ53FD0 456 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 FUT10Q6P4F1 479 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 FAM178BQ8IXR5 827 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 C12orf76Q8N812 135 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 DDX12PQ92771 950 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 DHX58Q96C10 678 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 MSLNLQ96KJ4 702 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 HERC2P3Q9BVR0 1158 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 GPR62Q9BZJ7 368 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
HDDC2-204ENST00000608295 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
HDDC2-204ENST00000608295 C5orf42Q9H799 3197 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 TISP43B9A030 160 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 ABLIM1O14639 778 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 TRAK2O60296 914 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 SOD2P04179 222 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 SRGAP2BP0DMP2 458 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 RPL17P18621 184 aaKnown RBP15.86■□□□□ 0.13
HDDC2-204ENST00000608295 IGFBP6P24592 240 aaPredicted RBP15.86■□□□□ 0.13
HDDC2-204ENST00000608295 DDIT3P35638 169 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 GRM5P41594 1212 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 GLUD2P49448 558 aa15.86■□□□□ 0.13
HDDC2-204ENST00000608295 ZBTB41Q5SVQ8 909 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms