RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 HSPA9P38646 679 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 MARCKSL1P49006 195 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 MUM1Q2TAK8 710 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 UBXN6Q9BZV1 441 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 MED1Q15648 1581 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 CCDC160A6NGH7 325 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PPP1R11O60927 126 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PHF2O75151 1096 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PLS3P13797 630 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TFAMQ00059 246 aaKnown RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TAF11Q15544 211 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 IQCKQ8N0W5 287 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 NEUROG2Q9H2A3 272 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 DIAPH2O60879 1101 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 ACOT2P49753 483 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 SOX10P56693 466 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 MAPK7Q13164 816 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 NT5DC3Q86UY8 548 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 CBWD2Q8IUF1 395 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 ANKMY2Q8IV38 441 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TOPORSQ9NS56 1045 aaPredicted RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PDHA1P08559 390 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 SCTRP47872 440 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 DHX34Q14147 1143 aaKnown RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 TMC3Q7Z5M5 1100 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PPFIBP2Q8ND30 876 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 ACTRT1Q8TDG2 376 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 RUBCNQ92622 972 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 PABPC3Q9H361 631 aaKnown RBP11.05□□□□□ -0.64
CTCFL-216ENST00000608263 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
CTCFL-216ENST00000608263 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 OPLAHO14841 1288 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 CDC25CP30307 473 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 QARSP47897 775 aaKnown RBP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 NT5C2P49902 561 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 QPCTQ16769 361 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 TRPM8Q7Z2W7 1104 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 FAM151AQ8WW52 585 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 KAT2BQ92831 832 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 PCSK1NQ9UHG2 260 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 RTN2O75298 545 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 FECHP22830 423 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 ITIH3Q06033 890 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 GPS1Q13098 491 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 SEZ6Q53EL9 994 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 AGBL2Q5U5Z8 902 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 KRT39Q6A163 491 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 LMNTD2Q8IXW0 634 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 CARD9Q9H257 536 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 GANQ9H2C0 597 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 PNMA3Q9UL41 463 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 L3MBTL1Q9Y468 752 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 ABCC6O95255 1503 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 F5H423 210 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
CTCFL-216ENST00000608263 EPHA7Q15375 998 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 DAB2IPQ5VWQ8 1189 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 IRF2BP2Q7Z5L9 587 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 SLC47A2Q86VL8 602 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 SGSM3Q96HU1 749 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
CTCFL-216ENST00000608263 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 RPS6KA5O75582 802 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 CYP2B6P20813 491 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 DLG4P78352 724 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SKOR1P84550 965 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 BAATQ14032 418 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SWSAP1Q6NVH7 229 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 DNAJC24Q6P3W2 148 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ZBTB8OSQ8IWT0 167 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ZBED8Q8IZ13 594 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms