RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MCPH1Q8NEM0 835 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 ST13P5Q8NFI4 369 aaPredicted RBP16.44■□□□□ 0.22
CTSA-216ENST00000607212 DEPTORQ8TB45 409 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 HDAC7Q8WUI4 952 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 TNFRSF25Q93038 417 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 ZDHHC7Q9NXF8 308 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 A0A1B0GUA9 196 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 JAK2O60674 1132 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 NPR3P17342 541 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 TUSC3Q13454 348 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 PRPF4BQ13523 1007 aaKnown RBP16.43■□□□□ 0.22
CTSA-216ENST00000607212 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
CTSA-216ENST00000607212 MAPK6Q16659 721 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
CTSA-216ENST00000607212 PRIMPOLQ96LW4 560 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 NACC1Q96RE7 527 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 C2orf40Q9H1Z8 148 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 CHST7Q9NS84 486 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 SNTG2Q9NY99 539 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.43■□□□□ 0.22
CTSA-216ENST00000607212 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 EPS15L1Q9UBC2 864 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 WNT16Q9UBV4 365 aa16.43■□□□□ 0.22
CTSA-216ENST00000607212 WNT7AO00755 349 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 PRKCBP05771 671 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 THP07101 528 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 SRFP11831 508 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTSA-216ENST00000607212 FSHRP23945 695 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 NEK4P51957 841 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 PSMD5Q16401 504 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 PPM1LQ5SGD2 360 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 NXPE3Q969Y0 559 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 ZNF707Q96C28 371 aaPredicted RBP16.42■□□□□ 0.22
CTSA-216ENST00000607212 SNX27Q96L92 541 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 GDAQ9Y2T3 454 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 DOCK8Q8NF50 2099 aa16.42■□□□□ 0.22
CTSA-216ENST00000607212 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 MED24O75448 989 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 ZMYND10O75800 440 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 RECQL4O94761 1208 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 KIF4AO95239 1232 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 LAMP2P13473 410 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 ZNF174Q15697 407 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 RTP2Q5QGT7 225 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 PADI6Q6TGC4 694 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
CTSA-216ENST00000607212 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 GSTCDQ8NEC7 633 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 IFT74Q96LB3 600 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 MTMR9Q96QG7 549 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 HINFPQ9BQA5 517 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 PAAF1Q9BRP4 392 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
CTSA-216ENST00000607212 KRBA1A5PL33 1030 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 CCL16O15467 120 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 XYLBO75191 536 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 C8AP07357 584 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 ELAVL2Q12926 359 aaKnown RBP16.4■□□□□ 0.22
CTSA-216ENST00000607212 PPP2R5AQ15172 486 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 RHOBTB2Q9BYZ6 727 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 ARHGEF3Q9NR81 526 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 USP20Q9Y2K6 914 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 NUMBLQ9Y6R0 609 aa16.4■□□□□ 0.22
CTSA-216ENST00000607212 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
CTSA-216ENST00000607212 PTPRZ1P23471 2315 aaPredicted RBP16.4■□□□□ 0.22
CTSA-216ENST00000607212 EFEMP2O95967 443 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 DCNP07585 359 aaKnown RBP16.39■□□□□ 0.21
CTSA-216ENST00000607212 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 NTHL1P78549 312 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 HAUS3Q68CZ6 603 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.21
CTSA-216ENST00000607212 PDXDC1Q6P996 788 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 DCLRE1AQ6PJP8 1040 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 APBB1IPQ7Z5R6 666 aaPredicted RBP16.39■□□□□ 0.21
CTSA-216ENST00000607212 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 BSNDQ8WZ55 320 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
CTSA-216ENST00000607212 FZD8Q9H461 694 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 DOCK6Q96HP0 2047 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.21
CTSA-216ENST00000607212 C1RP00736 705 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 CCT6AP40227 531 aaKnown RBP16.38■□□□□ 0.21
CTSA-216ENST00000607212 NAMPTP43490 491 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms