RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 SNTG2Q9NY99 539 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 CXXC1Q9P0U4 656 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 TRIP11Q15643 1979 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ABHD14A-ACY1A0A1B0GW23 586 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 EXTL3O43909 919 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 EXOC3O60645 756 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 AKAP3O75969 853 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 RECQL4O94761 1208 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 BAIAP3O94812 1187 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ADRB2P07550 413 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 STAG3L1P0CL83 205 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 CXCL8P10145 99 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 FGFR1P11362 822 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ITGA4P13612 1032 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 MLH1P40692 756 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ZNF165P49910 485 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 RAB27AP51159 221 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 WNT7BP56706 349 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 MYL5Q02045 173 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ADAM9Q13443 819 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 SNRNP35Q16560 246 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 NFIL3Q16649 462 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 HSP90AA4PQ58FG1 418 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 C9orf50Q5SZB4 431 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 APBB1IPQ7Z5R6 666 aaPredicted RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 SLC9A9Q8IVB4 645 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 GPD1LQ8N335 351 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 RDH13Q8NBN7 331 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 ZFP42Q96MM3 310 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 CCDC94Q9BW85 323 aaPredicted RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 NAT10Q9H0A0 1025 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 CBX8Q9HC52 389 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 RNF19AQ9NV58 838 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 KLK14Q9P0G3 267 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 CPSF3Q9UKF6 684 aaKnown RBP8.37□□□□□ -1.07
MSH6-211ENST00000606499 NFE2L3Q9Y4A8 694 aa8.37□□□□□ -1.07
MSH6-211ENST00000606499 PTPRJQ12913 1337 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 TTC3P53804 2025 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 KIAA0391O15091 583 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 CETN3O15182 167 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 EFCAB14O75071 495 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 ZNF623O75123 536 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 UPP2O95045 317 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 AMHP03971 560 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 CLTAP09496 248 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 SKIP12755 728 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 KCNJ6P48051 423 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 GATMP50440 423 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 AFF1P51825 1210 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 FAM189BP81408 668 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FKBP3Q00688 224 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 MLLT1Q03111 559 aaPredicted RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 SPAG1Q07617 926 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 NCAPHQ15003 741 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 IQCB1Q15051 598 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 TPD52L1Q16890 204 aaPredicted RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 CLLU1OSQ5K130 101 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 SPATA1Q5VX52 437 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FOXR2Q6PJQ5 311 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 MRPL10Q7Z7H8 261 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 LUZP1Q86V48 1076 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 IRF2BP1Q8IU81 584 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 NPAS4Q8IUM7 802 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 BRSK2Q8IWQ3 736 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 DHX40Q8IX18 779 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 FAM186BQ8IYM0 893 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 CRIPAKQ8N1N5 446 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 PLEKHO2Q8TD55 490 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 HELQQ8TDG4 1101 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 TMEM174Q8WUU8 243 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 HERVK_113Q902F9 699 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 SNX27Q96L92 541 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 FBXL18Q96ME1 805 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 GDF15Q99988 308 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 BPIFA3Q9BQP9 254 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 UBE2OQ9C0C9 1292 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 SAMSN1Q9NSI8 373 aaKnown RBP8.36□□□□□ -1.07
MSH6-211ENST00000606499 TMEM161AQ9NX61 479 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
MSH6-211ENST00000606499 INPP5FQ9Y2H2 1132 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms