RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 IL18RAPO95256 599 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CA3P07451 260 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ADRB2P07550 413 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FGFR1P11362 822 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MATR3P43243 847 aaKnown RBP eCLIP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ERVK-21P61565 698 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LRRC63Q05C16 580 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ENPEPQ07075 957 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 EDRF1Q3B7T1 1238 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ARMCX5Q6P1M9 558 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RNF169Q8NCN4 708 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SNX27Q96L92 541 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 UROC1Q96N76 676 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ACAP3Q96P50 834 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TGS1Q96RS0 853 aaKnown RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TMEM175Q9BSA9 504 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ASB7Q9H672 318 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 AGPAT3Q9NRZ7 376 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CPSF3Q9UKF6 684 aaKnown RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 AGO2Q9UKV8 859 aaKnown RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 DERAQ9Y315 318 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TBKBP1A7MCY6 615 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PSMA7O14818 248 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 MAPK13O15264 365 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PRPF6O94906 941 aaKnown RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KCNE1P15382 129 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PAX3P23760 479 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ADSSP30520 456 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 HOXD13P35453 343 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 MLH1P40692 756 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 UBE3AQ05086 875 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 DSC1Q08554 894 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KCNA1Q09470 495 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 MORC3Q14149 939 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 SURF1Q15526 300 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KLHL40Q2TBA0 621 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 SKOR2Q2VWA4 1001 aaPredicted RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ALKAL1Q6UXT8 129 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 USP37Q86T82 979 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GPD1LQ8N335 351 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 C11orf84Q9BUA3 381 aaPredicted RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FGFBP2Q9BYJ0 223 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KCTD10Q9H3F6 313 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TBC1D13Q9NVG8 400 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LZTS1Q9Y250 596 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 YBX2Q9Y2T7 364 aaKnown RBP10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 HES2Q9Y543 173 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TRIP11Q15643 1979 aa10.33□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TTC26A0AVF1 554 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 BICDL2A1A5D9 508 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GRXCR1A8MXD5 290 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ANKRD63C9JTQ0 380 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 EXTL3O43909 919 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 THP07101 528 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LINC00271P0C7V0 271 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CYP3A5P20815 502 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 RPL13P26373 211 aaKnown RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ALDH7A1P49419 539 aaKnown RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 RABGGTBP53611 331 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TAP1Q03518 808 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 RNASELQ05823 741 aaKnown RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TUSC3Q13454 348 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ZCWPW2Q504Y3 356 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CENPPQ6IPU0 288 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CDR2LQ86X02 465 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 BRSK2Q8IWQ3 736 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 THNSL1Q8IYQ7 743 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ADSSL1Q8N142 457 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 XXYLT1Q8NBI6 393 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GLIS3Q8NEA6 775 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GSTCDQ8NEC7 633 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GPT2Q8TD30 523 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LPPQ93052 612 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 HPS3Q969F9 1004 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 DHTKD1Q96HY7 919 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ZNF558Q96NG5 402 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FAM193BQ96PV7 902 aaPredicted RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TSG101Q99816 390 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LMAN2LQ9H0V9 348 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 NKX2-4Q9H2Z4 354 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 RPF1Q9H9Y2 349 aaKnown RBP10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 SNTG2Q9NY99 539 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 HSPBP1Q9NZL4 362 aa10.32□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PARP2Q9UGN5 583 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms