RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
DDX55P1-201ENST00000603334 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
DDX55P1-201ENST00000603334 HSPBP1Q9NZL4 362 aa11.22□□□□□ -0.61
DDX55P1-201ENST00000603334 ARHGAP28Q9P2N2 729 aa11.22□□□□□ -0.61
DDX55P1-201ENST00000603334 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
DDX55P1-201ENST00000603334 IGKV6-21A0A0C4DH24 114 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 ABHD14A-ACY1A0A1B0GW23 586 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 AFPP02771 609 aaKnown RBP11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 SCP2P22307 547 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 EFNA5P52803 228 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 MGAT3Q09327 533 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 LRMPQ12912 555 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 TRIM14Q14142 442 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 SLC9A9Q8IVB4 645 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 TRIM59Q8IWR1 403 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 PHOSPHO2Q8TCD6 241 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 TCHPQ9BT92 498 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 NUP58Q9BVL2 599 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 DMAC2Q9NW81 257 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 USP20Q9Y2K6 914 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 ZKSCAN5Q9Y2L8 839 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.61
DDX55P1-201ENST00000603334 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 ESPNB1AK53 854 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 NBNO60934 754 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 CHRNA1P02708 482 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 PRKCBP05771 671 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 CASP14P31944 242 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 PBX1P40424 430 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 MAPK6Q16659 721 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 PLEKHG4Q58EX7 1191 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 SLFN12LQ6IEE8 588 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 C12orf56Q8IXR9 622 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 SEPT8Q92599 483 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 TARS2Q9BW92 718 aaKnown RBP11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 KCNF1Q9H3M0 494 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 MUC3AQ02505 3323 aa11.2□□□□□ -0.62
DDX55P1-201ENST00000603334 A0A087WZ62 844 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 VTNP04004 478 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 SKILP12757 684 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 GARTP22102 1010 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 PBX2P40425 430 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 PHKA2P46019 1235 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 KLK7P49862 253 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 CRYBB1P53674 252 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 IKBKEQ14164 716 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 MBTPS1Q14703 1052 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 TAS1R3Q7RTX0 852 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 GPD1LQ8N335 351 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 ZNF397Q8NF99 534 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 ERGIC2Q96RQ1 377 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 FDXACB1Q9BRP7 624 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 CRACR2AQ9BSW2 395 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 MRPL4Q9BYD3 311 aaKnown RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 PBX4Q9BYU1 374 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 FAM49AQ9H0Q0 323 aaPredicted RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 STXBP5LQ9Y2K9 1186 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 LUC7L2Q9Y383 392 aaKnown RBP11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 PHLPP2Q6ZVD8 1323 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 MICAL3Q7RTP6 2002 aa11.19□□□□□ -0.62
DDX55P1-201ENST00000603334 LDHAP00338 332 aaKnown RBP11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 DNAJB2P25686 324 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 KRT9P35527 623 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 VAMP7P51809 220 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 OTOP2Q7RTS6 562 aa11.18□□□□□ -0.62
DDX55P1-201ENST00000603334 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms