RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TNNI1P19237 187 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 POLR2FP61218 127 aaKnown RBP19.52■□□□□ 0.71
VRK3-225ENST00000601912 SNX17Q15036 470 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 SURF1Q15526 300 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 PTGISQ16647 500 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 ZBTB41Q5SVQ8 909 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 KLHDC7AQ5VTJ3 777 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 EEF1DP3Q658K8 133 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 TRIM65Q6PJ69 517 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 BRSK2Q8IWQ3 736 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 THNSL1Q8IYQ7 743 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 DNAJC5GQ8N7S2 189 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 CPB2Q96IY4 423 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 POP1Q99575 1024 aaKnown RBP19.52■□□□□ 0.71
VRK3-225ENST00000601912 CELF4Q9BZC1 486 aaKnown RBP19.52■□□□□ 0.71
VRK3-225ENST00000601912 TMEM117Q9H0C3 514 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 UNC93B1Q9H1C4 597 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 CDT1Q9H211 546 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 PDZD7Q9H5P4 517 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 GRIN2DO15399 1336 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 CENPFP49454 3210 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 KBTBD13C9JR72 458 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 FAM189A1O60320 539 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 CLDN10P78369 228 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 MRPS6P82932 125 aaKnown RBP19.51■□□□□ 0.71
VRK3-225ENST00000601912 RRAGAQ7L523 313 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 RPAINQ86UA6 219 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 CDR2LQ86X02 465 aaPredicted RBP19.51■□□□□ 0.71
VRK3-225ENST00000601912 TMTC1Q8IUR5 882 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 TMEM139Q8IV31 216 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 EHBP1Q8NDI1 1231 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 INTS2Q9H0H0 1204 aaKnown RBP19.51■□□□□ 0.71
VRK3-225ENST00000601912 PDE11AQ9HCR9 933 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 FBXL5Q9UKA1 691 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 CPSF3Q9UKF6 684 aaKnown RBP19.51■□□□□ 0.71
VRK3-225ENST00000601912 NOD1Q9Y239 953 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 DAAM1Q9Y4D1 1078 aa19.51■□□□□ 0.71
VRK3-225ENST00000601912 ACTN1P12814 892 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 UCHL3P15374 230 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 FGFR4P22455 802 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 AXLP30530 894 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 SEZ6Q53EL9 994 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 CYP26C1Q6V0L0 522 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 GANQ9H2C0 597 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 NLRC4Q9NPP4 1024 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 HTTP42858 3142 aa19.5■□□□□ 0.71
VRK3-225ENST00000601912 FECHP22830 423 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 TNFSF9P41273 254 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 KCNJ6P48051 423 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 AP3M2P53677 418 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 POU5F1Q01860 360 aaKnown RBP19.49■□□□□ 0.71
VRK3-225ENST00000601912 DCAF4L1Q3SXM0 396 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 NOTUMQ6P988 496 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 RPF1Q9H9Y2 349 aaKnown RBP19.49■□□□□ 0.71
VRK3-225ENST00000601912 PAK6Q9NQU5 681 aaPredicted RBP19.49■□□□□ 0.71
VRK3-225ENST00000601912 STARD7Q9NQZ5 370 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 TRPV2Q9Y5S1 764 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 A0A1W2PQ45 241 aaPredicted RBP19.49■□□□□ 0.71
VRK3-225ENST00000601912 A0A1W2PQY0 241 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 CLTAP09496 248 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 PTK7Q13308 1070 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 EPC2Q52LR7 807 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 SV2AQ7L0J3 742 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 FBXL13Q8NEE6 735 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 BAP1Q92560 729 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 CGRRF1Q99675 332 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 TOPORSQ9NS56 1045 aaPredicted RBP19.49■□□□□ 0.71
VRK3-225ENST00000601912 PLAGL2Q9UPG8 496 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 PHF24Q9UPV7 400 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 COQ4Q9Y3A0 265 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 CDY2AQ9Y6F7 541 aa19.49■□□□□ 0.71
VRK3-225ENST00000601912 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
VRK3-225ENST00000601912 LRRC53A6NM62 1247 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 IL18RAPO95256 599 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 RFX1P22670 979 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 HOXA11P31270 313 aaPredicted RBP19.48■□□□□ 0.71
VRK3-225ENST00000601912 OSTNP61366 133 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 APBA1Q02410 837 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 MEA1Q16626 185 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 DPY19L2P1Q6NXN4 242 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 PDXDC1Q6P996 788 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 TMEM40Q8WWA1 233 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 SYN2Q92777 582 aaPredicted RBP19.48■□□□□ 0.71
VRK3-225ENST00000601912 FAM212AQ96EL1 285 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 SPAG5Q96R06 1193 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 SEZ6LQ9BYH1 1024 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 RNF208Q9H0X6 261 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 SIX2Q9NPC8 291 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 APEX2Q9UBZ4 518 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 MYO6Q9UM54 1294 aa19.48■□□□□ 0.71
VRK3-225ENST00000601912 DNM1LO00429 736 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 MYCP01106 439 aaPredicted RBP19.47■□□□□ 0.71
VRK3-225ENST00000601912 STAG3L1P0CL83 205 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 CCL5P13501 91 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 HNRNPH3P31942 346 aaKnown RBP19.47■□□□□ 0.71
VRK3-225ENST00000601912 THPOP40225 353 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 SFMBT2Q5VUG0 894 aa19.47■□□□□ 0.71
VRK3-225ENST00000601912 WDR49Q8IV35 697 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms