RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 PHF20Q9BVI0 1012 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 PLA2G2FQ9BZM2 168 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 XPNPEP1Q9NQW7 623 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 KLK14Q9P0G3 267 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 POLIQ9UNA4 740 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 GIT1Q9Y2X7 761 aa17.86■□□□□ 0.45
SSBP4-211ENST00000601614 NR1I2O75469 434 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 HNRNPA1P09651 372 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSBP4-211ENST00000601614 TDGF1P13385 188 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 MAGEA9P43362 315 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 PTENP60484 403 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 EMC2Q15006 297 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 NPY5RQ15761 445 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 LPAL2Q16609 132 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 PPM1LQ5SGD2 360 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 NOTUMQ6P988 496 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 TICRRQ7Z2Z1 1910 aa17.85■□□□□ 0.45
SSBP4-211ENST00000601614 LNX1Q8TBB1 728 aaPredicted RBP17.85■□□□□ 0.45
SSBP4-211ENST00000601614 SECISBP2LQ93073 1101 aaKnown RBP17.85■□□□□ 0.45
SSBP4-211ENST00000601614 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.85■□□□□ 0.45
SSBP4-211ENST00000601614 CNOT1A5YKK6 2376 aaKnown RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 B4GALT5O43286 388 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 TBC1D4O60343 1298 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 ARF4P18085 180 aaPredicted RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 AXLP30530 894 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 RFC5P40937 340 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 RPS9P46781 194 aaKnown RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 NLRP5P59047 1200 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 PFKPQ01813 784 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 AKAP17AQ02040 695 aaKnown RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 MBTD1Q05BQ5 628 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 SPEM2Q0P670 501 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 GRIK3Q13003 919 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 MTAPQ13126 283 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 LIN9Q5TKA1 542 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 ING5Q8WYH8 240 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 PIK3R5Q8WYR1 880 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 SH3GLB2Q9NR46 395 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 HEBP1Q9NRV9 189 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 DNMT3BQ9UBC3 853 aaKnown RBP17.84■□□□□ 0.45
SSBP4-211ENST00000601614 PCDHA4Q9UN74 947 aa17.84■□□□□ 0.45
SSBP4-211ENST00000601614 ASAP2O43150 1006 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 TADA2AO75478 443 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 P4HBP07237 508 aaKnown RBP17.83■□□□□ 0.44
SSBP4-211ENST00000601614 IFNAR1P17181 557 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 HOXA9P31269 272 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 FGD1P98174 961 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 CREMQ03060 361 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-211ENST00000601614 PSMD5Q16401 504 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 MOXD1Q6UVY6 613 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 IFNLR1Q8IU57 520 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-211ENST00000601614 ZNF687Q8N1G0 1237 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 SLC7A14Q8TBB6 771 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 ASAP3Q8TDY4 903 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 TCP11Q8WWU5 503 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 RGL1Q9NZL6 768 aa17.83■□□□□ 0.44
SSBP4-211ENST00000601614 DDX25Q9UHL0 483 aaKnown RBP17.83■□□□□ 0.44
SSBP4-211ENST00000601614 SF3B1O75533 1304 aaKnown RBP eCLIP17.82■□□□□ 0.444e-6■■■■■ 89
SSBP4-211ENST00000601614 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 INO80B-WBP1J3KQ70 363 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 KIF4AO95239 1232 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 IGFBP6P24592 240 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-211ENST00000601614 YWHABP31946 246 aaKnown RBP17.82■□□□□ 0.44
SSBP4-211ENST00000601614 INF2Q27J81 1249 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 PPM1JQ5JR12 505 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 FAM171A1Q5VUB5 890 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 C4orf19Q8IY42 314 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 MTRQ99707 1265 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 LXNQ9BS40 222 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 TTPALQ9BTX7 342 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 TRIM6Q9C030 488 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-211ENST00000601614 KCNMB3Q9NPA1 279 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 GMEB2Q9UKD1 530 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 RALYQ9UKM9 306 aaKnown RBP17.82■□□□□ 0.44
SSBP4-211ENST00000601614 PPME1Q9Y570 386 aa17.82■□□□□ 0.44
SSBP4-211ENST00000601614 NRG2O14511 850 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 SLC30A4O14863 429 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 NPTXRO95502 500 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 ADCY1Q08828 1119 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 CAPSQ13938 189 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 KRT32Q14532 448 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 PCBP1Q15365 356 aaKnown RBP eCLIP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 SLC5A9Q2M3M2 681 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 PABPC1LQ4VXU2 614 aaKnown RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 XKR9Q5GH70 373 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-211ENST00000601614 SKAP1Q86WV1 359 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 BLIDQ8IZY5 108 aa17.81■□□□□ 0.44
SSBP4-211ENST00000601614 MCRS1Q96EZ8 462 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms