RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TMEM134Q9H6X4 195 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 C17orf75Q9HAS0 396 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 ADAM28Q9UKQ2 775 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 HCN4Q9Y3Q4 1203 aa24.94■■□□□ 1.58
SSBP4-209ENST00000601357 TEX28O15482 410 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 WEE2P0C1S8 567 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 FUT10Q6P4F1 479 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 TAS1R3Q7RTX0 852 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 GPR65Q8IYL9 337 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 FEZF2Q8TBJ5 459 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 RABGGTAQ92696 567 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 NT5C3AQ9H0P0 336 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 SFXN1Q9H9B4 322 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 CACNG4Q9UBN1 327 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 TNFSF13BQ9Y275 285 aa24.93■■□□□ 1.58
SSBP4-209ENST00000601357 CCDC169A6NNP5 214 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 DMP1Q13316 513 aaPredicted RBP24.92■■□□□ 1.58
SSBP4-209ENST00000601357 HSP90AA2PQ14568 343 aaPredicted RBP24.92■■□□□ 1.58
SSBP4-209ENST00000601357 TMEM119Q4V9L6 283 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 BRAPQ7Z569 592 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 SYT2Q8N9I0 419 aaPredicted RBP24.92■■□□□ 1.58
SSBP4-209ENST00000601357 AK8Q96MA6 479 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 NTPCRQ9BSD7 190 aaKnown RBP24.92■■□□□ 1.58
SSBP4-209ENST00000601357 PTPRHQ9HD43 1115 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 NR2E1Q9Y466 385 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 TECTAO75443 2155 aa24.92■■□□□ 1.58
SSBP4-209ENST00000601357 C2orf16Q68DN1 1984 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 THP07101 528 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 ADH1AP07327 375 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 SLC12A3P55017 1021 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 ZXDAP98168 799 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 USP41Q3LFD5 358 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 ATAT1Q5SQI0 421 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 TMC5Q6UXY8 1006 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 HFE2Q6ZVN8 426 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 B3GALT6Q96L58 329 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 ACO2Q99798 780 aaKnown RBP24.91■■□□□ 1.58
SSBP4-209ENST00000601357 KMT5AQ9NQR1 393 aa24.91■■□□□ 1.58
SSBP4-209ENST00000601357 RBM19Q9Y4C8 960 aaKnown RBP24.91■■□□□ 1.58
SSBP4-209ENST00000601357 SLC26A4O43511 780 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 C1RP00736 705 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 SP100P23497 879 aaPredicted RBP24.9■■□□□ 1.58
SSBP4-209ENST00000601357 ZRSR1Q15695 479 aaKnown RBP24.9■■□□□ 1.58
SSBP4-209ENST00000601357 PTPN21Q16825 1174 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 GPR149Q86SP6 731 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 CDT1Q9H211 546 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 KCND2Q9NZV8 630 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 GDAQ9Y2T3 454 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 MYH11P35749 1972 aa24.9■■□□□ 1.58
SSBP4-209ENST00000601357 SF3B1O75533 1304 aaKnown RBP eCLIP24.89■■□□□ 1.584e-6■■■■■ 89
SSBP4-209ENST00000601357 WDFY4Q6ZS81 3184 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 CASTOR2A6NHX0 329 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 SFI1A8K8P3 1242 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 C2CD4DB7Z1M9 353 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 ABLIM1O14639 778 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 KIF4AO95239 1232 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 PROZP22891 400 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 C15orf39Q6ZRI6 1047 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 TRIM67Q6ZTA4 783 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 APBB1IPQ7Z5R6 666 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-209ENST00000601357 CMASQ8NFW8 434 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-209ENST00000601357 SPIRE2Q8WWL2 714 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 PLIN2Q99541 437 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 MRPL4Q9BYD3 311 aaKnown RBP24.89■■□□□ 1.58
SSBP4-209ENST00000601357 BACH2Q9BYV9 841 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 MAN1C1Q9NR34 630 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 TSHZ2Q9NRE2 1034 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.89■■□□□ 1.58
SSBP4-209ENST00000601357 FNIP2Q9P278 1114 aa24.89■■□□□ 1.58
SSBP4-209ENST00000601357 TRIP11Q15643 1979 aa24.89■■□□□ 1.57
SSBP4-209ENST00000601357 SLC16A4O15374 487 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 TADA2AO75478 443 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 PAPLNO95428 1278 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 BMP15O95972 392 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 PLA2G4BP0C869 781 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 PLS3P13797 630 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 GRM5P41594 1212 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 BMP8AQ7Z5Y6 402 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 CDK5RAP3Q96JB5 506 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 PPP1R10Q96QC0 940 aaKnown RBP24.88■■□□□ 1.57
SSBP4-209ENST00000601357 USTQ9Y2C2 406 aa24.88■■□□□ 1.57
SSBP4-209ENST00000601357 MTCL1Q9Y4B5 1905 aaKnown RBP24.88■■□□□ 1.57
SSBP4-209ENST00000601357 BRD1O95696 1058 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 GLUD1P00367 558 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 PLA2G5P39877 138 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 RAD51AP2Q09MP3 1159 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 ZNF568Q3ZCX4 644 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 ARSHQ5FYA8 562 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 XKR4Q5GH76 650 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 RTP2Q5QGT7 225 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 ALKAL1Q6UXT8 129 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 CEP120Q8N960 986 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 TMEM161BQ8NDZ6 487 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 LRRC15Q8TF66 581 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 HASPINQ8TF76 798 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 RIN2Q8WYP3 895 aaPredicted RBP24.87■■□□□ 1.57
SSBP4-209ENST00000601357 TARS2Q9BW92 718 aaKnown RBP24.87■■□□□ 1.57
SSBP4-209ENST00000601357 RHOBTB2Q9BYZ6 727 aa24.87■■□□□ 1.57
SSBP4-209ENST00000601357 TMEM221A6NGB7 291 aa24.86■■□□□ 1.57
SSBP4-209ENST00000601357 M0R296 226 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms