RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	POU2F2	P09086	479 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	SRGAP2C	P0DJJ0	459 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	ADD1	P35611	737 aa	Known RBP	12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	NPEPPS	P55786	919 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	CSRP2	Q16527	193 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	ZNF852	Q6ZMS4	543 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	SYNE3	Q6ZMZ3	975 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	CNNM3	Q8NE01	707 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	PAAF1	Q9BRP4	392 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	COLEC11	Q9BWP8	271 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	DHX33	Q9H6R0	707 aa	Known RBP	12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	C6orf50	Q9HD87	102 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	GREB1	Q4ZG55	1949 aa		12.35	□□□□□ -0.43
NUP62-222	ENST00000600935	NRG2	O14511	850 aa	Predicted RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	TM4SF5	O14894	197 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	NCAM2	O15394	837 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	TSPAN1	O60635	241 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	ECI2	O75521	394 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	FCAR	P24071	287 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	CREM	Q03060	361 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	DMWD	Q09019	674 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	LAMTOR4	Q0VGL1	99 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	GAS6	Q14393	721 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	SLC5A9	Q2M3M2	681 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	PPM1L	Q5SGD2	360 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	LNX1	Q8TBB1	728 aa	Predicted RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	ING5	Q8WYH8	240 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	TMEM143	Q96AN5	459 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	NXF3	Q9H4D5	531 aa	Known RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	DNMT3B	Q9UBC3	853 aa	Known RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	RAB23	Q9ULC3	237 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	TICRR	Q7Z2Z1	1910 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	SDK1	Q7Z5N4	2213 aa		12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	GCN1	Q92616	2671 aa	Known RBP	12.34	□□□□□ -0.43
NUP62-222	ENST00000600935	HR	O43593	1189 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	USP11	P51784	963 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	NRL	P54845	237 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	SRSF5	Q13243	272 aa	Known RBP	12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	AMHR2	Q16671	573 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935		Q4G0T1	1027 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	LIN9	Q5TKA1	542 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	TANGO2	Q6ICL3	276 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	PRR23B	Q6ZRT6	265 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	SLC7A14	Q8TBB6	771 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	ETNPPL	Q8TBG4	499 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	PSPC1	Q8WXF1	523 aa	Known RBP	12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	PIK3R5	Q8WYR1	880 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	CPB2	Q96IY4	423 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	JPH2	Q9BR39	696 aa	Predicted RBP	12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	KCNH3	Q9ULD8	1083 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	NDRG2	Q9UN36	371 aa	Known RBP	12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	POLI	Q9UNA4	740 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	MRPS17	Q9Y2R5	130 aa	Known RBP	12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	GIT1	Q9Y2X7	761 aa		12.33	□□□□□ -0.44
NUP62-222	ENST00000600935	KLF18	A0A0U1RQI7	1052 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	EML1	O00423	815 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	XYLB	O75191	536 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	NR1I2	O75469	434 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	TDP2	O95551	362 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	AKAP5	P24588	427 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	GNA11	P29992	359 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	PSMC5	P62195	406 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	SATB1	Q01826	763 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	PSMD5	Q16401	504 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	PABPC1L	Q4VXU2	614 aa	Known RBP	12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	FERMT3	Q86UX7	667 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	RNF149	Q8NC42	400 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	HASPIN	Q8TF76	798 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	SLC7A3	Q8WY07	619 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	DNASE1L2	Q92874	299 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	CCDC51	Q96ER9	411 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	TTPAL	Q9BTX7	342 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	APOL6	Q9BWW8	343 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	CSRNP2	Q9H175	543 aa		12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
NUP62-222	ENST00000600935	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	KIF4A	O95239	1232 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	PROS1	P07225	676 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	CEBPB	P17676	345 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	KCNA4	P22459	653 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	CYP3A7	P24462	503 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	AXL	P30530	894 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	HOXC13	P31276	330 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	LIMK1	P53667	647 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	RCAN1	P53805	252 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	PTEN	P60484	403 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	GRIK3	Q13003	919 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	SIM2	Q14190	667 aa	Predicted RBP	12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	ADCK5	Q3MIX3	580 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	NOTUM	Q6P988	496 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	DDX1	Q92499	740 aa	Known RBP	12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	ELSPBP1	Q96BH3	223 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	MCRS1	Q96EZ8	462 aa		12.31	□□□□□ -0.44
NUP62-222	ENST00000600935	IER2	Q9BTL4	223 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms