RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 RAB27AP51159 221 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 IKBKEQ14164 716 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 SLC24A5Q71RS6 500 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 IRF2BP1Q8IU81 584 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 MKNK1Q9BUB5 465 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 APOL6Q9BWW8 343 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 RBSNQ9H1K0 784 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 C1orf112Q9NSG2 853 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 SNTG2Q9NY99 539 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 CPSF3Q9UKF6 684 aaKnown RBP22.28■■□□□ 1.16
PNKP-215ENST00000600910 ZNF233A6NK53 670 aa22.27■■□□□ 1.16
PNKP-215ENST00000600910 GOLGA6L19H0YKK7 550 aa22.27■■□□□ 1.16
PNKP-215ENST00000600910 SLC16A3O15427 465 aaKnown RBP22.27■■□□□ 1.16
PNKP-215ENST00000600910 ADRB2P07550 413 aa22.27■■□□□ 1.16
PNKP-215ENST00000600910 EPB41P11171 864 aaKnown RBP22.27■■□□□ 1.16
PNKP-215ENST00000600910 KYAT1Q16773 422 aa22.27■■□□□ 1.16
PNKP-215ENST00000600910 FAM186BQ8IYM0 893 aa22.27■■□□□ 1.16
PNKP-215ENST00000600910 LBHD1Q9BQE6 289 aaPredicted RBP22.27■■□□□ 1.16
PNKP-215ENST00000600910 CCDC94Q9BW85 323 aaPredicted RBP22.27■■□□□ 1.16
PNKP-215ENST00000600910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.26■■□□□ 1.15
PNKP-215ENST00000600910 ZNF623O75123 536 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 CLTAP09496 248 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 SKIP12755 728 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 HSP90AA2PQ14568 343 aaPredicted RBP22.26■■□□□ 1.15
PNKP-215ENST00000600910 CDKAL1Q5VV42 579 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 C16orf59Q7L2K0 433 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 ECHDC2Q86YB7 292 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 CREBRFQ8IUR6 639 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 CNOT6LQ96LI5 555 aaKnown RBP22.26■■□□□ 1.15
PNKP-215ENST00000600910 ACAP3Q96P50 834 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 RNF39Q9H2S5 420 aa22.26■■□□□ 1.15
PNKP-215ENST00000600910 RBAKQ9NYW8 714 aaPredicted RBP22.26■■□□□ 1.15
PNKP-215ENST00000600910 MAPK13O15264 365 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 GNA14O95837 355 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 CXCL8P10145 99 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 ATF7P17544 494 aaPredicted RBP22.25■■□□□ 1.15
PNKP-215ENST00000600910 AKAP5P24588 427 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 ENOX2Q16206 610 aaKnown RBP22.25■■□□□ 1.15
PNKP-215ENST00000600910 CCDC40Q4G0X9 1142 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 MRPL10Q7Z7H8 261 aaKnown RBP22.25■■□□□ 1.15
PNKP-215ENST00000600910 FAM114A1Q8IWE2 563 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 MICAL3Q7RTP6 2002 aa22.25■■□□□ 1.15
PNKP-215ENST00000600910 ABHD14A-ACY1A0A1B0GW23 586 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 ZNF18P17022 549 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 EPHB4P54760 987 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 FAM189BP81408 668 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 BRSK2Q8IWQ3 736 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 HACE1Q8IYU2 909 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 RNF169Q8NCN4 708 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 LPPQ93052 612 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 BORCS6Q96GS4 357 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 RPF1Q9H9Y2 349 aaKnown RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 MAGEC2Q9UBF1 373 aaPredicted RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 PARP2Q9UGN5 583 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 MEIS3P2A8K0S8 358 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 KCNJ18B7U540 433 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 TULP1O00294 542 aaPredicted RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 RECQL4O94761 1208 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 ACTN1P12814 892 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 ITGA4P13612 1032 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 MARSP56192 900 aaKnown RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 TPM4P67936 248 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 CYP24A1Q07973 514 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 KCNJ12Q14500 433 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.24■■□□□ 1.15
PNKP-215ENST00000600910 ZNF365Q70YC5 407 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 OTOP2Q7RTS6 562 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 FRMD5Q7Z6J6 570 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 ZNF598Q86UK7 904 aaKnown RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 MFSD14AQ96MC6 490 aa22.24■■□□□ 1.15
PNKP-215ENST00000600910 ARMCX3Q9UH62 379 aaPredicted RBP22.24■■□□□ 1.15
PNKP-215ENST00000600910 MEFVO15553 781 aaPredicted RBP22.23■■□□□ 1.15
PNKP-215ENST00000600910 FGBP02675 491 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 YARSP54577 528 aaKnown RBP22.23■■□□□ 1.15
PNKP-215ENST00000600910 WNT7BP56706 349 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 SLC10A6Q3KNW5 377 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 TCP11X2Q5H9J9 407 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 INTS8Q75QN2 995 aaKnown RBP22.23■■□□□ 1.15
PNKP-215ENST00000600910 PGBD4Q96DM1 585 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 FAM212AQ96EL1 285 aa22.23■■□□□ 1.15
PNKP-215ENST00000600910 METTL14Q9HCE5 456 aaKnown RBP22.23■■□□□ 1.15
PNKP-215ENST00000600910 EFCAB14O75071 495 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 BAIAP3O94812 1187 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 EOMESO95936 686 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 ATP1A3P13637 1013 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 KRT13P13646 458 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 CDK11BP21127 795 aaKnown RBP22.22■■□□□ 1.15
PNKP-215ENST00000600910 EEF1GP26641 437 aaKnown RBP22.22■■□□□ 1.15
PNKP-215ENST00000600910 POU5F1Q01860 360 aaKnown RBP22.22■■□□□ 1.15
PNKP-215ENST00000600910 BFSP1Q12934 665 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 PSRC1Q6PGN9 363 aaPredicted RBP22.22■■□□□ 1.15
PNKP-215ENST00000600910 AGMOQ6ZNB7 445 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 PLEKHO2Q8TD55 490 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 CCDC127Q96BQ5 260 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.153e-9■■■□□ 18.5
PNKP-215ENST00000600910 PDE11AQ9HCR9 933 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 TOPORSQ9NS56 1045 aaPredicted RBP22.22■■□□□ 1.15
PNKP-215ENST00000600910 TMEM161AQ9NX61 479 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 KLK14Q9P0G3 267 aa22.22■■□□□ 1.15
PNKP-215ENST00000600910 CAPN15O75808 1086 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms