RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ME1P48163 572 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 KRT85P78386 507 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 TMEM132AQ24JP5 1023 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 ZC2HC1CQ53FD0 456 aaPredicted RBP17.27■□□□□ 0.36
RPS28-203ENST00000600659 XKR4Q5GH76 650 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 ALKAL1Q6UXT8 129 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 MAP4K3Q8IVH8 894 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 HACE1Q8IYU2 909 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 DHX58Q96C10 678 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 TNMDQ9H2S6 317 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 IKZF4Q9H2S9 585 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 TBX20Q9UMR3 447 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 COG5Q9UP83 839 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 GDAQ9Y2T3 454 aa17.27■□□□□ 0.36
RPS28-203ENST00000600659 H0YCG3 227 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 TBX10O75333 385 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 DLX2Q07687 328 aaPredicted RBP17.26■□□□□ 0.35
RPS28-203ENST00000600659 MCL1Q07820 350 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 STRN3Q13033 797 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 KCNC3Q14003 757 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 ZNF720Q7Z2F6 126 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 ZBTB33Q86T24 672 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
RPS28-203ENST00000600659 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 VN1R2Q8NFZ6 395 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
RPS28-203ENST00000600659 HLA-CQ95604 372 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
RPS28-203ENST00000600659 TCF25Q9BQ70 676 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 CUEDC2Q9H467 287 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 ZHX3Q9H4I2 956 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 NCOR1O75376 2440 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 C5orf42Q9H799 3197 aa17.26■□□□□ 0.35
RPS28-203ENST00000600659 PLXNA3P51805 1871 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 TISP43B9A030 160 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 POLR2DO15514 142 aaKnown RBP17.25■□□□□ 0.35
RPS28-203ENST00000600659 KCNQ1P51787 676 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 CASP5P51878 434 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 NOLC1Q14978 699 aaKnown RBP eCLIP17.25■□□□□ 0.35
RPS28-203ENST00000600659 TMEM169Q96HH4 297 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 SNX27Q96L92 541 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 ZMAT2Q96NC0 199 aaKnown RBP17.25■□□□□ 0.35
RPS28-203ENST00000600659 ASB2Q96Q27 587 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
RPS28-203ENST00000600659 OLFML3Q9NRN5 406 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 ANKFY1Q9P2R3 1169 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 SEL1LQ9UBV2 794 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 FAN1Q9Y2M0 1017 aa17.25■□□□□ 0.35
RPS28-203ENST00000600659 PRG3Q9Y2Y8 225 aaPredicted RBP17.25■□□□□ 0.35
RPS28-203ENST00000600659 CUL9Q8IWT3 2517 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 CTSAP10619 480 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 SCP2P22307 547 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 IGFBP6P24592 240 aaPredicted RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 KRT17Q04695 432 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 EHHADHQ08426 723 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 KCNA1Q09470 495 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 DUSP6Q16828 381 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 SEZ6Q53EL9 994 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 GLRA4Q5JXX5 417 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 ZBTB41Q5SVQ8 909 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 PDE12Q6L8Q7 609 aaKnown RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 IQUBQ8NA54 791 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 GLIS3Q8NEA6 775 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 GDPD2Q9HCC8 539 aa17.24■□□□□ 0.35
RPS28-203ENST00000600659 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 PUF60Q9UHX1 559 aaKnown RBP17.24■□□□□ 0.35
RPS28-203ENST00000600659 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 PER2O15055 1255 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 LILRB3O75022 631 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 ALDH2P05091 517 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 HARSP12081 509 aaKnown RBP17.23■□□□□ 0.35
RPS28-203ENST00000600659 BMP1P13497 986 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 PFKFB1P16118 471 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 GAP43P17677 238 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 CMA1P23946 247 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 CASP1P29466 404 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 OR1G1P47890 313 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 NRIP1P48552 1158 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 OSTNP61366 133 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
RPS28-203ENST00000600659 SOX4Q06945 474 aaPredicted RBP17.23■□□□□ 0.35
RPS28-203ENST00000600659 COASYQ13057 564 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 ADAM15Q13444 863 aa17.23■□□□□ 0.35
RPS28-203ENST00000600659 TUSC3Q13454 348 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms