RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
USHBP1-210ENST00000600286 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 NXF3Q9H4D5 531 aaKnown RBP18.2■□□□□ 0.5
USHBP1-210ENST00000600286 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 HES2Q9Y543 173 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 SIP14410 1827 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 TBKBP1A7MCY6 615 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 CLIC2O15247 247 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 EXTL3O43909 919 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 EXOC3O60645 756 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 DGKIO75912 1065 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 AKAP5P24588 427 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 HOXD13P35453 343 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 POU5F1Q01860 360 aaKnown RBP18.19■□□□□ 0.5
USHBP1-210ENST00000600286 BTG3Q14201 252 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-210ENST00000600286 MYBPC2Q14324 1141 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 NOMO2Q5JPE7 1267 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 CT47A1Q5JQC4 288 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-210ENST00000600286 SPOUT1Q5T280 376 aaKnown RBP18.19■□□□□ 0.5
USHBP1-210ENST00000600286 KLHL10Q6JEL2 608 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 SLC39A4Q6P5W5 647 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 CD302Q8IX05 232 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 GPD1LQ8N335 351 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 HELQQ8TDG4 1101 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 LPPQ93052 612 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 FAM193BQ96PV7 902 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-210ENST00000600286 KCTD10Q9H3F6 313 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 PLEKHA5Q9HAU0 1116 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 ANO10Q9NW15 660 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 HSPBP1Q9NZL4 362 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 TMEM63CQ9P1W3 806 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 TRAF3IP3Q9Y228 551 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 INPP5FQ9Y2H2 1132 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 FRMD4BQ9Y2L6 1034 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 PCDHA11Q9Y5I1 949 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 CHD7Q9P2D1 2997 aa18.19■□□□□ 0.5
USHBP1-210ENST00000600286 CARNS1A5YM72 827 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 ZNF233A6NK53 670 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 ABLIM1O14639 778 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 TGFB1I1O43294 461 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 RECQL4O94761 1208 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 FGFR1OPO95684 399 aaKnown RBP18.18■□□□□ 0.5
USHBP1-210ENST00000600286 FGFR1P11362 822 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 CCNE1P24864 410 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 ADSSP30520 456 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 CYP2J2P51589 502 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 LRRC63Q05C16 580 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 AGMOQ6ZNB7 445 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 RBM43Q6ZSC3 357 aaKnown RBP18.18■□□□□ 0.5
USHBP1-210ENST00000600286 C12orf56Q8IXR9 622 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 CMTR2Q8IYT2 770 aaKnown RBP18.18■□□□□ 0.5
USHBP1-210ENST00000600286 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 P2RX5Q93086 422 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 TSPAN18Q96SJ8 248 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 FAM213AQ9BRX8 229 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
USHBP1-210ENST00000600286 TTYH1Q9H313 450 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-210ENST00000600286 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-210ENST00000600286 ZMYM2Q9UBW7 1377 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 ARL5CA6NH57 179 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 TISP43B9A030 160 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 CETN3O15182 167 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 OFD1O75665 1012 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 NR3C1P04150 777 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-210ENST00000600286 ACOT2P49753 483 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 HTRA4P83105 476 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-210ENST00000600286 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 PAK1Q13153 545 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 ADAM9Q13443 819 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 SURF1Q15526 300 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 TPD52L1Q16890 204 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-210ENST00000600286 EDRF1Q3B7T1 1238 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 CENPPQ6IPU0 288 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 USP37Q86T82 979 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 SLC9A9Q8IVB4 645 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 NELFBQ8WX92 580 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 GAD1Q99259 594 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 AAASQ9NRG9 546 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 KLK14Q9P0G3 267 aa18.17■□□□□ 0.5
USHBP1-210ENST00000600286 PPP1R3GB7ZBB8 358 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 XPOTO43592 962 aaKnown RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 IL18RAPO95256 599 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 THP07101 528 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 NR2F2P24468 414 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 MLH1P40692 756 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 STX1AQ16623 288 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 NFIL3Q16649 462 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 PAN2Q504Q3 1202 aaKnown RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 TMCO2Q7Z6W1 182 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-210ENST00000600286 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 LRRC43Q8N309 656 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 TMEM174Q8WUU8 243 aa18.16■□□□□ 0.5
USHBP1-210ENST00000600286 ZNF689Q96CS4 500 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms