RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 KCNJ6P48051 423 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 ZNF165P49910 485 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 CLDN10P78369 228 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 MYL5Q02045 173 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 SPAG1Q07617 926 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 SMYD4Q8IYR2 804 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 CPB2Q96IY4 423 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 RPF1Q9H9Y2 349 aaKnown RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 TTC3P53804 2025 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 PMM2O15305 246 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 NPTXRO95502 500 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 EPB41P11171 864 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 KCNE1P15382 129 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 GTF2H1P32780 548 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 BRSK2Q8IWQ3 736 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 FAM200AQ8TCP9 573 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 ZBTB45Q96K62 511 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 DUSP9Q99956 384 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.274e-6■■■□□ 16.2
TGFB1-204ENST00000600196 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
TGFB1-204ENST00000600196 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 SLC38A7Q9NVC3 462 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
TGFB1-204ENST00000600196 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 TTC26A0AVF1 554 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 KRT13P13646 458 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 SYN1P17600 705 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 CYP3A5P20815 502 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
TGFB1-204ENST00000600196 TPM4P67936 248 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 PSMD6Q15008 389 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 TPD52L1Q16890 204 aaPredicted RBP13.36□□□□□ -0.27
TGFB1-204ENST00000600196 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
TGFB1-204ENST00000600196 BORCS6Q96GS4 357 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
TGFB1-204ENST00000600196 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
TGFB1-204ENST00000600196 HAPLN2Q9GZV7 340 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 TSPY26PQ9H489 355 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 CNTN3Q9P232 1028 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 CTNND2Q9UQB3 1225 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
TGFB1-204ENST00000600196 H0YGN5 161 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 CLIC2O15247 247 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 DGKIO75912 1065 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ATF7P17544 494 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ZBTB33Q86T24 672 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 THNSL1Q8IYQ7 743 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 URGCPQ8TCY9 931 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 FAXDC2Q96IV6 333 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 FAM213AQ9BRX8 229 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 STK39Q9UEW8 545 aa13.35□□□□□ -0.27
TGFB1-204ENST00000600196 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
TGFB1-204ENST00000600196 BECN2A8MW95 431 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 P4HA2O15460 535 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 OFD1O75665 1012 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 AKAP3O75969 853 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 GJB5O95377 273 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 ACRP10323 421 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 RPL9P32969 192 aaKnown RBP13.34□□□□□ -0.27
TGFB1-204ENST00000600196 EPHB4P54760 987 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 GRIK3Q13003 919 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 IQCB1Q15051 598 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 ZBTB6Q15916 424 aa13.34□□□□□ -0.27
TGFB1-204ENST00000600196 ENOX2Q16206 610 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms