RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 IL18RAPO95256 599 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
KHSRP-211ENST00000599642 UVSSAQ2YD98 709 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 CDKAL1Q5VV42 579 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 EEF1DP3Q658K8 133 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 AOPEPQ8N6M6 819 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 LBHD1Q9BQE6 289 aaPredicted RBP20.22■□□□□ 0.83
KHSRP-211ENST00000599642 HAPLN2Q9GZV7 340 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 GIT1Q9Y2X7 761 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 PCDHB2Q9Y5E7 798 aa20.22■□□□□ 0.83
KHSRP-211ENST00000599642 HOXA2O43364 376 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 NPTXRO95502 500 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 CSF2RAP15509 400 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 ITGB8P26012 769 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 AP3M2P53677 418 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
KHSRP-211ENST00000599642 BRSK2Q8IWQ3 736 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 RPF1Q9H9Y2 349 aaKnown RBP20.21■□□□□ 0.83
KHSRP-211ENST00000599642 TMEM161AQ9NX61 479 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 DERAQ9Y315 318 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 IPPQ9Y573 584 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
KHSRP-211ENST00000599642 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 ENPP3O14638 875 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 INPPL1O15357 1258 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 STX10O60499 249 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 STAG3L1P0CL83 205 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 KRT13P13646 458 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 ZNF18P17022 549 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 CYP2J2P51589 502 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 CEP135Q66GS9 1140 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 CRELD2Q6UXH1 353 aaPredicted RBP20.2■□□□□ 0.82
KHSRP-211ENST00000599642 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 FAM186BQ8IYM0 893 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 BORCS6Q96GS4 357 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 MTIF3Q9H2K0 278 aaKnown RBP20.2■□□□□ 0.82
KHSRP-211ENST00000599642 PCIF1Q9H4Z3 704 aa20.2■□□□□ 0.82
KHSRP-211ENST00000599642 ARMCX3Q9UH62 379 aaPredicted RBP20.2■□□□□ 0.82
KHSRP-211ENST00000599642 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
KHSRP-211ENST00000599642 TISP43B9A030 160 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 MGEA5O60502 916 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 AKAP3O75969 853 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 TPM2P07951 284 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 CLDN10P78369 228 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 PSMD6Q15008 389 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 XKR4Q5GH76 650 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 ZBTB33Q86T24 672 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 ZNF598Q86UK7 904 aaKnown RBP20.19■□□□□ 0.82
KHSRP-211ENST00000599642 THNSL1Q8IYQ7 743 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 SMG8Q8ND04 991 aaKnown RBP20.19■□□□□ 0.82
KHSRP-211ENST00000599642 BADQ92934 168 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 FAM213AQ9BRX8 229 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 EIF2AQ9BY44 585 aaKnown RBP20.19■□□□□ 0.82
KHSRP-211ENST00000599642 FANCLQ9NW38 375 aa20.19■□□□□ 0.82
KHSRP-211ENST00000599642 CARNS1A5YM72 827 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 PMM2O15305 246 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 XPOTO43592 962 aaKnown RBP20.18■□□□□ 0.82
KHSRP-211ENST00000599642 FGBP02675 491 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 ITGA4P13612 1032 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 GTF2H1P32780 548 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 BFSP1Q12934 665 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 CCDC40Q4G0X9 1142 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 TCP11X2Q5H9J9 407 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 ALKAL1Q6UXT8 129 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 RTN4RL1Q86UN2 441 aaPredicted RBP20.18■□□□□ 0.82
KHSRP-211ENST00000599642 IRF2BP1Q8IU81 584 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 NPAS4Q8IUM7 802 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 RBAKQ9NYW8 714 aaPredicted RBP20.18■□□□□ 0.82
KHSRP-211ENST00000599642 KANSL3Q9P2N6 904 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 C2CD2Q9Y426 696 aa20.18■□□□□ 0.82
KHSRP-211ENST00000599642 TTC26A0AVF1 554 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 KCNJ18B7U540 433 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 CDK11BP21127 795 aaKnown RBP20.17■□□□□ 0.82
KHSRP-211ENST00000599642 ACOT2P49753 483 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 KCNJ12Q14500 433 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 LUZP1Q86V48 1076 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 TRIM59Q8IWR1 403 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 CRIPAKQ8N1N5 446 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 PARD3BQ8TEW8 1205 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 LINC01599Q8WXQ3 324 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 SAAL1Q96ER3 474 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 CNOT6LQ96LI5 555 aaKnown RBP20.17■□□□□ 0.82
KHSRP-211ENST00000599642 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 CNTN3Q9P232 1028 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 LIMA1Q9UHB6 759 aaKnown RBP20.17■□□□□ 0.82
KHSRP-211ENST00000599642 USP20Q9Y2K6 914 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 PCDHB7Q9Y5E2 793 aa20.17■□□□□ 0.82
KHSRP-211ENST00000599642 FNDC1Q4ZHG4 1894 aaPredicted RBP20.16■□□□□ 0.82
KHSRP-211ENST00000599642 P4HA2O15460 535 aa20.16■□□□□ 0.82
KHSRP-211ENST00000599642 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
KHSRP-211ENST00000599642 AMHP03971 560 aa20.16■□□□□ 0.82
KHSRP-211ENST00000599642 KCNE1P15382 129 aa20.16■□□□□ 0.82
KHSRP-211ENST00000599642 CASP4P49662 377 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms