RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 FLCNQ8NFG4 579 aa16.15■□□□□ 0.18
EBI3-202ENST00000599339 DEPTORQ8TB45 409 aa16.15■□□□□ 0.18
EBI3-202ENST00000599339 FEZF2Q8TBJ5 459 aa16.15■□□□□ 0.18
EBI3-202ENST00000599339 GPR62Q9BZJ7 368 aa16.15■□□□□ 0.18
EBI3-202ENST00000599339 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
EBI3-202ENST00000599339 RFPL2O75678 378 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 PRKCBP05771 671 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 CYP11B2P19099 503 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 NAMPTP43490 491 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 GUCY1B3Q02153 619 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 ELAVL2Q12926 359 aaKnown RBP16.14■□□□□ 0.17
EBI3-202ENST00000599339 POTEGQ6S5H5 508 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 NXPE3Q969Y0 559 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 B3GALT6Q96L58 329 aa16.14■□□□□ 0.17
EBI3-202ENST00000599339 LLPHQ9BRT6 129 aaKnown RBP16.14■□□□□ 0.17
EBI3-202ENST00000599339 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
EBI3-202ENST00000599339 ZFHX2Q9C0A1 2572 aaPredicted RBP16.14■□□□□ 0.17
EBI3-202ENST00000599339 TGM5O43548 720 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 THP07101 528 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 SPATA31D3P0C874 917 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 MYBP10242 640 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
EBI3-202ENST00000599339 ZNF174Q15697 407 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 PDXDC1Q6P996 788 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 SPATA31D4Q6ZUB0 917 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 APBB1IPQ7Z5R6 666 aaPredicted RBP16.13■□□□□ 0.17
EBI3-202ENST00000599339 GLYCTKQ8IVS8 523 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
EBI3-202ENST00000599339 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 RTP3Q9BQQ7 232 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 PRKD2Q9BZL6 878 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 PDZD7Q9H5P4 517 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 SNTG2Q9NY99 539 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.13■□□□□ 0.17
EBI3-202ENST00000599339 EPS15L1Q9UBC2 864 aa16.13■□□□□ 0.17
EBI3-202ENST00000599339 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
EBI3-202ENST00000599339 MTCL1Q9Y4B5 1905 aaKnown RBP16.12■□□□□ 0.17
EBI3-202ENST00000599339 CASTOR2A6NHX0 329 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 ACKR2O00590 384 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 PAPLNO95428 1278 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 LIG1P18858 919 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 AOC1P19801 751 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 RFX1P22670 979 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
EBI3-202ENST00000599339 EFNA5P52803 228 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 ST3GAL1Q11201 340 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 LIN9Q5TKA1 542 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 SIX5Q8N196 739 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 KIFAP3Q92845 792 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 STK24Q9Y6E0 443 aa16.12■□□□□ 0.17
EBI3-202ENST00000599339 N4BP1O75113 896 aaKnown RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 ZMYND10O75800 440 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 RECQL4O94761 1208 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 RPL17P18621 184 aaKnown RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 PSMD5Q16401 504 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 RTP2Q5QGT7 225 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 FAM171A1Q5VUB5 890 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 CWF19L1Q69YN2 538 aaKnown RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 LILRA6Q6PI73 481 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 PRSS55Q6UWB4 352 aaPredicted RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 GET4Q7L5D6 327 aaPredicted RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 CEP57Q86XR8 500 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 HASPINQ8TF76 798 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 PIK3R5Q8WYR1 880 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 BSNDQ8WZ55 320 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 ZSCAN31Q96LW9 406 aaPredicted RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 MYADMQ96S97 322 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 RAB34Q9BZG1 259 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 WNT16Q9UBV4 365 aa16.11■□□□□ 0.17
EBI3-202ENST00000599339 ZFP37Q9Y6Q3 630 aaPredicted RBP16.11■□□□□ 0.17
EBI3-202ENST00000599339 STK25O00506 426 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 PTGESO14684 152 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 KIF4AO95239 1232 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
EBI3-202ENST00000599339 SRFP11831 508 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 NBL1P41271 181 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
EBI3-202ENST00000599339 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 SLC44A3Q8N4M1 653 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 PAAF1Q9BRP4 392 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 LRWD1Q9UFC0 647 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 FBXW11Q9UKB1 542 aa16.1■□□□□ 0.17
EBI3-202ENST00000599339 TTLL13PA6NNM8 815 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 CFHP08603 1231 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 LAMP2P13473 410 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 NPR3P17342 541 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 FSHRP23945 695 aa16.09■□□□□ 0.17
EBI3-202ENST00000599339 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms