RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CELF5Q8N6W0 485 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 LINC01465Q8N7H1 131 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 FAM105AQ9NUU6 356 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 MARCH5Q9NX47 278 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 ZDHHC7Q9NXF8 308 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 RALGAPA1Q6GYQ0 2036 aa15.48■□□□□ 0.07
SHKBP1-218ENST00000598907 MYH9P35579 1960 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 TCHHQ07283 1943 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 GAS2O43903 313 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 FOSP01100 380 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 TDGF1P13385 188 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 RPS9P46781 194 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 AP3B2Q13367 1082 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 CCDC6Q16204 474 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 FERMT3Q86UX7 667 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 FGF13Q92913 245 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 PLEKHA4Q9H4M7 779 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 HEBP1Q9NRV9 189 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 GABBR1Q9UBS5 961 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 POLIQ9UNA4 740 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 ZFP37Q9Y6Q3 630 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-218ENST00000598907 F8W810 466 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 ALDH2P05091 517 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 SKIP12755 728 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 OR1G1P47890 313 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 NRLP54845 237 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 DRP2Q13474 957 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 PPP2R5DQ14738 602 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 SF3A2Q15428 464 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 JAKMIP3Q5VZ66 844 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 ZNF852Q6ZMS4 543 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 KRT25Q7Z3Z0 450 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 CRYGNQ8WXF5 182 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 TMEM175Q9BSA9 504 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 ANO3Q9BYT9 981 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 GCOM2Q9BZD3 368 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 CHST12Q9NRB3 414 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 LHX6Q9UPM6 363 aa15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 MAFBQ9Y5Q3 323 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-218ENST00000598907 DOCK6Q96HP0 2047 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM205CA6NFA0 338 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 MEIS1O00470 390 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 EDIL3O43854 480 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 ZIC2O95409 532 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 RAB27AP51159 221 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 ADCY1Q08828 1119 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 AGMOQ6ZNB7 445 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 C12orf50Q8NA57 414 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 ITFG1Q8TB96 612 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 HDAC7Q8WUI4 952 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 ING5Q8WYH8 240 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 NELL2Q99435 816 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 RSAD1Q9HA92 442 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 RXFP1Q9HBX9 757 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 MRPS17Q9Y2R5 130 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
SHKBP1-218ENST00000598907 A0A087WZ62 844 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 CCDC194A0A1B0GVG4 234 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 CHURC1-FNTBB4DL54 471 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 ZMYND10O75800 440 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 SPINK2P20155 84 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FNTBP49356 437 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FZD5Q13467 585 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FOXD4L5Q5VV16 416 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 PIK3AP1Q6ZUJ8 805 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 CATSPER4Q7RTX7 472 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM167AQ96KS9 214 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 FDXACB1Q9BRP7 624 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 CHRDQ9H2X0 955 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 RXFP3Q9NSD7 469 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 GCN1Q92616 2671 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-218ENST00000598907 IPO5O00410 1097 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 CCL16O15467 120 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 DHX15O43143 795 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 HRO43593 1189 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 OATP04181 439 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 PSAPP07602 524 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 CYP3A4P08684 503 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 SREBF1P36956 1147 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 TRAPPC10P48553 1259 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 SATB1Q01826 763 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 PRKCEQ02156 737 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 DSG1Q02413 1049 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 RING1Q06587 406 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 FOXC1Q12948 553 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 HEATR6Q6AI08 1181 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms