RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
TGFB1-202ENST00000597453 MRE11P49959 708 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 TCF15Q12870 199 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 PRPF4BQ13523 1007 aaKnown RBP16.73■□□□□ 0.27
TGFB1-202ENST00000597453 MAPK6Q16659 721 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 HAUS3Q68CZ6 603 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 C15orf39Q6ZRI6 1047 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 CCDC149Q6ZUS6 474 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 UBALD2Q8IYN6 164 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 BHMT2Q9H2M3 363 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 SNTG2Q9NY99 539 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
TGFB1-202ENST00000597453 KIAA1024Q9UPX6 916 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 DMDP11532 3685 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 MYO15AQ9UKN7 3530 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
TGFB1-202ENST00000597453 ACKR2O00590 384 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 N4BP3O15049 544 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 RFPL2O75678 378 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 RECQL4O94761 1208 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 GLUD1P00367 558 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 RPL17P18621 184 aaKnown RBP16.72■□□□□ 0.27
TGFB1-202ENST00000597453 MUTP22033 750 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 AVPR2P30518 371 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 HSP90AA2PQ14568 343 aaPredicted RBP16.72■□□□□ 0.27
TGFB1-202ENST00000597453 NAB2Q15742 525 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 PALB2Q86YC2 1186 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 CMASQ8NFW8 434 aaPredicted RBP16.72■□□□□ 0.27
TGFB1-202ENST00000597453 DEPTORQ8TB45 409 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 HASPINQ8TF76 798 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 SNX21Q969T3 373 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 PCDHB6Q9Y5E3 794 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
TGFB1-202ENST00000597453 CCDC195A0A1B0GUA6 201 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 CASTOR2A6NHX0 329 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 KIF4AO95239 1232 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 PTPN5P54829 565 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 PTGDRQ13258 359 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 TUSC3Q13454 348 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 USP41Q3LFD5 358 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 RTP2Q5QGT7 225 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 OTOP3Q7RTS5 596 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 RIN2Q8WYP3 895 aaPredicted RBP16.71■□□□□ 0.27
TGFB1-202ENST00000597453 ACSF2Q96CM8 615 aaPredicted RBP16.71■□□□□ 0.27
TGFB1-202ENST00000597453 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.27
TGFB1-202ENST00000597453 USP34Q70CQ2 3546 aa16.71■□□□□ 0.27
TGFB1-202ENST00000597453 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 TGM5O43548 720 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 N4BP1O75113 896 aaKnown RBP16.7■□□□□ 0.26
TGFB1-202ENST00000597453 TADA2AO75478 443 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 PDIA5Q14554 519 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 PPP2R5AQ15172 486 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 IL17AQ16552 155 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
TGFB1-202ENST00000597453 ZNF707Q96C28 371 aaPredicted RBP16.7■□□□□ 0.26
TGFB1-202ENST00000597453 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
TGFB1-202ENST00000597453 FNIP2Q9P278 1114 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
TGFB1-202ENST00000597453 SF3B1O75533 1304 aaKnown RBP eCLIP16.7■□□□□ 0.263e-15■■■■■ 126.4
TGFB1-202ENST00000597453 E9PMD0 336 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 THP07101 528 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 CDC25AP30304 524 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 DAW1Q8N136 415 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 KIFAP3Q92845 792 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 IFT74Q96LB3 600 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 PRRX2Q99811 253 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 ADPGKQ9BRR6 497 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 WDR6Q9NNW5 1121 aaKnown RBP16.69■□□□□ 0.26
TGFB1-202ENST00000597453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.69■□□□□ 0.26
TGFB1-202ENST00000597453 MYH11P35749 1972 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 CLUHO75153 1309 aa16.69■□□□□ 0.26
TGFB1-202ENST00000597453 H3BQV1 296 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 PAPLNO95428 1278 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
TGFB1-202ENST00000597453 GLRA4Q5JXX5 417 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 LARP1BQ659C4 914 aaKnown RBP16.68■□□□□ 0.26
TGFB1-202ENST00000597453 ELMSAN1Q6PJG2 1045 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 TMEM105Q8N8V8 129 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 HDAC7Q8WUI4 952 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 SMG7Q92540 1137 aaKnown RBP16.68■□□□□ 0.26
TGFB1-202ENST00000597453 RHOBTB2Q9BYZ6 727 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 KCNK12Q9HB15 430 aa16.68■□□□□ 0.26
TGFB1-202ENST00000597453 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.68■□□□□ 0.26
TGFB1-202ENST00000597453 FAM86C1Q9NVL1 165 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms