RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MARCH5Q9NX47 278 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 CLDND1Q9NY35 253 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 LINC01565O15544 149 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 TOM1L1O75674 476 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 EFEMP2O95967 443 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 MCF2P10911 925 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 GRM5P41594 1212 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 NRIP1P48552 1158 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 E2F4Q16254 413 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 DUSP6Q16828 381 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 ZNF568Q3ZCX4 644 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 DYMQ7RTS9 669 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 VPS52Q8N1B4 723 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 PDILTQ8N807 584 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 CEP120Q8N960 986 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 CDCA3Q99618 268 aaPredicted RBP23.12■■□□□ 1.29
PNKP-209ENST00000596726 ZHX3Q9H4I2 956 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 GDAQ9Y2T3 454 aa23.12■■□□□ 1.29
PNKP-209ENST00000596726 HIDE1A8MVS5 230 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 CTSAP10619 480 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 OR1G1P47890 313 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 GTF2BQ00403 316 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 DLX2Q07687 328 aaPredicted RBP23.11■■□□□ 1.29
PNKP-209ENST00000596726 SMC1AQ14683 1233 aaKnown RBP23.11■■□□□ 1.29
PNKP-209ENST00000596726 NAB2Q15742 525 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 ZBTB33Q86T24 672 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 RBM23Q86U06 439 aaKnown RBP23.11■■□□□ 1.29
PNKP-209ENST00000596726 FAM178BQ8IXR5 827 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 MRPL43Q8N983 215 aaKnown RBP23.11■■□□□ 1.29
PNKP-209ENST00000596726 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.11■■□□□ 1.29
PNKP-209ENST00000596726 ST6GALNAC4Q9H4F1 302 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 STK39Q9UEW8 545 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 TBX20Q9UMR3 447 aa23.11■■□□□ 1.29
PNKP-209ENST00000596726 K7ENM7 598 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 PER2O15055 1255 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 PIGRP01833 764 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 THP07101 528 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 NMT1P30419 496 aaKnown RBP23.1■■□□□ 1.29
PNKP-209ENST00000596726 ME1P48163 572 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 TUSC3Q13454 348 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 KCNC3Q14003 757 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 XKR4Q5GH76 650 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 TCHPQ9BT92 498 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 CCDC94Q9BW85 323 aaPredicted RBP23.1■■□□□ 1.29
PNKP-209ENST00000596726 CUEDC2Q9H467 287 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 PRG3Q9Y2Y8 225 aaPredicted RBP23.1■■□□□ 1.29
PNKP-209ENST00000596726 IRAK3Q9Y616 596 aa23.1■■□□□ 1.29
PNKP-209ENST00000596726 FRMD3A2A2Y4 597 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 C2orf71A6NGG8 1288 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 TBX10O75333 385 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 CXCL14O95715 111 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 GLP2RO95838 553 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 ABCD1P33897 745 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 MCL1Q07820 350 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 ALKAL1Q6UXT8 129 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 SFR1Q86XK3 245 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 RNF168Q8IYW5 571 aaPredicted RBP23.09■■□□□ 1.29
PNKP-209ENST00000596726 COLEC11Q9BWP8 271 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 HAPLN2Q9GZV7 340 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 KBTBD4Q9NVX7 518 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 SEL1LQ9UBV2 794 aa23.09■■□□□ 1.29
PNKP-209ENST00000596726 PDCD11Q14690 1871 aaKnown RBP23.09■■□□□ 1.29
PNKP-209ENST00000596726 FSD2A1L4K1 749 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 F8W810 466 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 H3BQ06 376 aaPredicted RBP23.08■■□□□ 1.29
PNKP-209ENST00000596726 DLL1O00548 723 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 NR1I2O75469 434 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 GAP43P17677 238 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 BMS1Q14692 1282 aaKnown RBP23.08■■□□□ 1.29
PNKP-209ENST00000596726 NOLC1Q14978 699 aaKnown RBP eCLIP23.08■■□□□ 1.29
PNKP-209ENST00000596726 RESP18Q5W5W9 173 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 EP400NLQ6ZTU2 488 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 ZNF720Q7Z2F6 126 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 VN1R2Q8NFZ6 395 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 CHAMP1Q96JM3 812 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 PPP1R10Q96QC0 940 aaKnown RBP23.08■■□□□ 1.29
PNKP-209ENST00000596726 STRA6Q9BX79 667 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 TNMDQ9H2S6 317 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 CLEC1BQ9P126 229 aa23.08■■□□□ 1.29
PNKP-209ENST00000596726 CLDN3O15551 220 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 PPP1R37O75864 691 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 OSTNP61366 133 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 KRT85P78386 507 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 ZC2HC1CQ53FD0 456 aaPredicted RBP23.07■■□□□ 1.28
PNKP-209ENST00000596726 TMEM184AQ6ZMB5 413 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 MAP4K3Q8IVH8 894 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 IQUBQ8NA54 791 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 LEO1Q8WVC0 666 aaPredicted RBP23.07■■□□□ 1.28
PNKP-209ENST00000596726 AUTS2Q8WXX7 1259 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 DHX58Q96C10 678 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 BICD1Q96G01 975 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 MSLNLQ96KJ4 702 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 ACAP3Q96P50 834 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 PAAF1Q9BRP4 392 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 TOPORSQ9NS56 1045 aaPredicted RBP23.07■■□□□ 1.28
PNKP-209ENST00000596726 ANKFY1Q9P2R3 1169 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 CACNG4Q9UBN1 327 aa23.07■■□□□ 1.28
PNKP-209ENST00000596726 TTC28Q96AY4 2481 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 GRXCR2A6NFK2 248 aa23.06■■□□□ 1.28
PNKP-209ENST00000596726 MEFVO15553 781 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms