RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 LIG4P49917 911 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 NDUFA8P51970 172 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 ASIC1P78348 528 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 KYAT1Q16773 422 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 XKR4Q5GH76 650 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 PDE12Q6L8Q7 609 aaKnown RBP19.97■□□□□ 0.79
ZNF558-204ENST00000596172 ALKAL1Q6UXT8 129 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 ZBTB33Q86T24 672 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 FSIP1Q8NA03 581 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 PAGE5Q96GU1 130 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 RPS6KC1Q96S38 1066 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 TOPORSQ9NS56 1045 aaPredicted RBP19.97■□□□□ 0.79
ZNF558-204ENST00000596172 DNAJB4Q9UDY4 337 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 STK39Q9UEW8 545 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 GDAQ9Y2T3 454 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 STYXL1Q9Y6J8 313 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 EYSQ5T1H1 3165 aa19.97■□□□□ 0.79
ZNF558-204ENST00000596172 MYH11P35749 1972 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 A0A0B4J269 797 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 PBX3P40426 434 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 YARSP54577 528 aaKnown RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 COASYQ13057 564 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 CCDC85BQ15834 202 aaPredicted RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 L1TD1Q5T7N2 865 aaKnown RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 UNC13DQ70J99 1090 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 IGSF21Q96ID5 467 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 ACAP3Q96P50 834 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 ACCSQ96QU6 501 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 GBP3Q9H0R5 595 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 NSUN3Q9H649 340 aaKnown RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 ANKFY1Q9P2R3 1169 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 EXOC7Q9UPT5 735 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 FAN1Q9Y2M0 1017 aa19.96■□□□□ 0.79
ZNF558-204ENST00000596172 PRRC2BQ5JSZ5 2229 aaKnown RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 COL4A4P53420 1690 aaPredicted RBP19.96■□□□□ 0.79
ZNF558-204ENST00000596172 PTGESO14684 152 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 NRP1O14786 923 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 NR1I2O75469 434 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 GCNT3O95395 438 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 THP07101 528 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 AFMP43652 599 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 EHHADHQ08426 723 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 SLFN12LQ6IEE8 588 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 SLC39A4Q6P5W5 647 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 STXBP4Q6ZWJ1 553 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 MICALL1Q8N3F8 863 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 CEP120Q8N960 986 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 TMEM169Q96HH4 297 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 HAPLN2Q9GZV7 340 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 TLR9Q9NR96 1032 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 TBC1D7Q9P0N9 293 aa19.95■□□□□ 0.78
ZNF558-204ENST00000596172 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 NT5C1B-RDH14C9J2C7 533 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 FSCN2O14926 492 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 CLTAP09496 248 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 KCNE1P15382 129 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 CASP5P51878 434 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 TUSC3Q13454 348 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 CUL4BQ13620 913 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 NAB2Q15742 525 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 DDX53Q86TM3 631 aaKnown RBP19.94■□□□□ 0.78
ZNF558-204ENST00000596172 PPM1EQ8WY54 764 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 GOLPH3LQ9H4A5 285 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 TMEM206Q9H813 350 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 PLEKHA5Q9HAU0 1116 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 NGRNQ9NPE2 291 aaKnown RBP19.94■□□□□ 0.78
ZNF558-204ENST00000596172 KIAA1671Q9BY89 1806 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 PRUNE2Q8WUY3 3088 aa19.94■□□□□ 0.78
ZNF558-204ENST00000596172 SMIM28A0A1B0GU29 152 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 ANKRD63C9JTQ0 380 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 OGTO15294 1046 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 NCK2O43639 380 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 FAM189A1O60320 539 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 ZNF202O95125 648 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 MYBP10242 640 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 ERVFC1P60507 584 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 OSTNP61366 133 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 POU5F1Q01860 360 aaKnown RBP19.93■□□□□ 0.78
ZNF558-204ENST00000596172 COL19A1Q14993 1142 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 POSTNQ15063 836 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 TMEM173Q86WV6 379 aaPredicted RBP19.93■□□□□ 0.78
ZNF558-204ENST00000596172 PPP2R3CQ969Q6 453 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 SNX27Q96L92 541 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 PPP1R10Q96QC0 940 aaKnown RBP19.93■□□□□ 0.78
ZNF558-204ENST00000596172 COLEC11Q9BWP8 271 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 CXCL16Q9H2A7 254 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 BLZF1Q9H2G9 400 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 CNTN3Q9P232 1028 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 TCHHQ07283 1943 aa19.93■□□□□ 0.78
ZNF558-204ENST00000596172 EIF3DO15371 548 aaKnown RBP eCLIP19.92■□□□□ 0.78
ZNF558-204ENST00000596172 EFEMP2O95967 443 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 ADRB2P07550 413 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 HARSP12081 509 aaKnown RBP19.92■□□□□ 0.78
ZNF558-204ENST00000596172 CASP1P29466 404 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 IRS1P35568 1242 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 MATR3P43243 847 aaKnown RBP eCLIP19.92■□□□□ 0.78
ZNF558-204ENST00000596172 OR1G1P47890 313 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 KCNA1Q09470 495 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 SLC10A6Q3KNW5 377 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 TCEAL5Q5H9L2 206 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms