RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 STK24Q9Y6E0 443 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 GVINP1Q7Z2Y8 2422 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 FAM186AA6NE01 2351 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 E9PMD0 336 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 N4BP1O75113 896 aaKnown RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 DGAT1O75907 488 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 POMCP01189 267 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 SRGAP2CP0DJJ0 459 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 PDIA4P13667 645 aaKnown RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 POU5F1BQ06416 359 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 HYIQ5T013 277 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 KIAA0319Q5VV43 1072 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 TCP11Q8WWU5 503 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 CCDC51Q96ER9 411 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 MFSD1Q9H3U5 465 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 IGSF9Q9P2J2 1179 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
USHBP1-205ENST00000595993 SSX2IPQ9Y2D8 614 aa17.61■□□□□ 0.41
USHBP1-205ENST00000595993 DMXL1Q9Y485 3027 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 TEX28O15482 410 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 TSPAN1O60635 241 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 SSBP05455 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 URODP06132 367 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 ADH1AP07327 375 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 AXLP30530 894 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 LONP1P36776 959 aaKnown RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 PTENP60484 403 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 SLC39A14Q15043 492 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 ZRSR1Q15695 479 aaKnown RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 AMHR2Q16671 573 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 PADI6Q6TGC4 694 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 GPR65Q8IYL9 337 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 RNF149Q8NC42 400 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 ASAP3Q8TDY4 903 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 HDAC7Q8WUI4 952 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 AK8Q96MA6 479 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 CLIC6Q96NY7 704 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 FAM193BQ96PV7 902 aaPredicted RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 PLIN2Q99541 437 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 WDR6Q9NNW5 1121 aaKnown RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 GPRC5CQ9NQ84 441 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 IPPQ9Y573 584 aa17.6■□□□□ 0.41
USHBP1-205ENST00000595993 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 TDRD15B5MCY1 1934 aaKnown RBP17.6■□□□□ 0.41
USHBP1-205ENST00000595993 DOCK8Q8NF50 2099 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
USHBP1-205ENST00000595993 ZMYM2Q9UBW7 1377 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 ARL5CA6NH57 179 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 PI15O43692 258 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 ITGA4P13612 1032 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 ARL2P36404 184 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 DSG1Q02413 1049 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 MAEAQ7L5Y9 396 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 LINC00301Q8NCQ3 95 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 EIF2AQ9BY44 585 aaKnown RBP17.59■□□□□ 0.41
USHBP1-205ENST00000595993 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 EPS15L1Q9UBC2 864 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
USHBP1-205ENST00000595993 DPP7Q9UHL4 492 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
USHBP1-205ENST00000595993 CACNA1AO00555 2505 aa17.59■□□□□ 0.41
USHBP1-205ENST00000595993 PTPRZ1P23471 2315 aaPredicted RBP17.59■□□□□ 0.41
USHBP1-205ENST00000595993 CYP11B2P19099 503 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 GLRA2P23416 452 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 GLUD2P49448 558 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 CAPSQ13938 189 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-205ENST00000595993 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 FRMD5Q7Z6J6 570 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 GSTCDQ8NEC7 633 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 FLCNQ8NFG4 579 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 ZNF707Q96C28 371 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-205ENST00000595993 CHAMP1Q96JM3 812 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 ZNF396Q96N95 335 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-205ENST00000595993 GAD1Q99259 594 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 RTP3Q9BQQ7 232 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 NFKBIZQ9BYH8 718 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 POLR3FQ9H1D9 316 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-205ENST00000595993 MIOSQ9NXC5 875 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 WNT16Q9UBV4 365 aa17.58■□□□□ 0.4
USHBP1-205ENST00000595993 PRG3Q9Y2Y8 225 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-205ENST00000595993 CLUHO75153 1309 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 CCDC195A0A1B0GUA6 201 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 ERLIN2O94905 339 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 GLUD1P00367 558 aa17.57■□□□□ 0.4
USHBP1-205ENST00000595993 MLH1P40692 756 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms