RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 P4HA2O15460 535 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 STX10O60499 249 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 CKBP12277 381 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 KLK7P49862 253 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 KYAT1Q16773 422 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 FIGNQ5HY92 759 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 ZNF618Q5T7W0 954 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 SLC27A1Q6PCB7 646 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 SLC39A5Q6ZMH5 540 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 CAGE1Q8TC20 777 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 TTYH3Q9C0H2 523 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 ERVK-5Q9HDB9 667 aa16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.01■□□□□ 0.15
SHKBP1-211ENST00000595945 GOLGA6L6A8MZA4 724 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 MEFVO15553 781 aaPredicted RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 N4BP1O75113 896 aaKnown RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 RPS6KA5O75582 802 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 CLTAP09496 248 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 STAG3L1P0CL83 205 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 GRM5P41594 1212 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 GSDMDP57764 484 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 TRIM14Q14142 442 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 LPIN1Q14693 890 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 ENOX2Q16206 610 aaKnown RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 C15orf39Q6ZRI6 1047 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 ANKRD33Q7Z3H0 272 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 USP37Q86T82 979 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 TMEM192Q8IY95 271 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 DIS3LQ8TF46 1054 aaKnown RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 ZNF516Q92618 1163 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 CCDC127Q96BQ5 260 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 CGRRF1Q99675 332 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 MCOLN1Q9GZU1 580 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 TMEM117Q9H0C3 514 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 AGO3Q9H9G7 860 aaKnown RBP16■□□□□ 0.15
SHKBP1-211ENST00000595945 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 ST3GAL5Q9UNP4 418 aa16■□□□□ 0.15
SHKBP1-211ENST00000595945 MROH7Q68CQ1 1323 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 NPTXRO95502 500 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 GYPCP04921 128 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 MBTPS1Q14703 1052 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 SURF1Q15526 300 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 EPC2Q52LR7 807 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 GBP6Q6ZN66 633 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 IQCDQ96DY2 449 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 TOX2Q96NM4 488 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 POP1Q99575 1024 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 CRACR2AQ9BSW2 395 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 EIF2AQ9BY44 585 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 SIX2Q9NPC8 291 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 PLCB1Q9NQ66 1216 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 CHST12Q9NRB3 414 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 TOPORSQ9NS56 1045 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 PIN4Q9Y237 131 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 COQ4Q9Y3A0 265 aa15.99■□□□□ 0.15
SHKBP1-211ENST00000595945 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 EPHB6O15197 1021 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 GPR182O15218 404 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 NOL4O94818 638 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 IL18RAPO95256 599 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 PTMAP06454 111 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 PON1P27169 355 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 GCLMP48507 274 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 MXI1P50539 228 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 MYL7Q01449 175 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 DSC3Q14574 896 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 ARID5BQ14865 1188 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 TC2NQ8N9U0 490 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 USP38Q8NB14 1042 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 LMO3Q8TAP4 145 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 NUP58Q9BVL2 599 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 EDEM3Q9BZQ6 932 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 GANQ9H2C0 597 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 RPF1Q9H9Y2 349 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 TMEM8AQ9HCN3 771 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 PADI3Q9ULW8 664 aa15.98■□□□□ 0.15
SHKBP1-211ENST00000595945 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 RBAK-RBAKDNI3L0D1 243 aa15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 TLR3O15455 904 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-211ENST00000595945 C4BPAP04003 597 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms