RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NT5C3AQ9H0P0 336 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 SFXN1Q9H9B4 322 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 CHST7Q9NS84 486 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 GDAQ9Y2T3 454 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 PTGESO14684 152 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 TEX28O15482 410 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 ADH1AP07327 375 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 HSP90AA2PQ14568 343 aaPredicted RBP25.83■■□□□ 1.73
LSM4-204ENST00000594828 USP41Q3LFD5 358 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 CDK5RAP3Q96JB5 506 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 PNMA5Q96PV4 448 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 PLIN2Q99541 437 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 TIPINQ9BVW5 301 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 TMEM134Q9H6X4 195 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 C17orf75Q9HAS0 396 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 RXFP1Q9HBX9 757 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 KMT5AQ9NQR1 393 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 TNFSF13BQ9Y275 285 aa25.83■■□□□ 1.73
LSM4-204ENST00000594828 RBM19Q9Y4C8 960 aaKnown RBP25.83■■□□□ 1.73
LSM4-204ENST00000594828 ARIH1Q9Y4X5 557 aaPredicted RBP25.83■■□□□ 1.73
LSM4-204ENST00000594828 ZXDAP98168 799 aa25.82■■□□□ 1.72
LSM4-204ENST00000594828 PAAF1Q9BRP4 392 aa25.82■■□□□ 1.72
LSM4-204ENST00000594828 CXCL16Q9H2A7 254 aa25.82■■□□□ 1.72
LSM4-204ENST00000594828 CACNG4Q9UBN1 327 aa25.82■■□□□ 1.72
LSM4-204ENST00000594828 PHLPP2Q6ZVD8 1323 aa25.82■■□□□ 1.72
LSM4-204ENST00000594828 CASTOR2A6NHX0 329 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 SFI1A8K8P3 1242 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 GUCY2CP25092 1073 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 MAPK7Q13164 816 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 TRIM67Q6ZTA4 783 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 SYT2Q8N9I0 419 aaPredicted RBP25.81■■□□□ 1.72
LSM4-204ENST00000594828 B3GALT6Q96L58 329 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 AK8Q96MA6 479 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 ACO2Q99798 780 aaKnown RBP25.81■■□□□ 1.72
LSM4-204ENST00000594828 ARHGAP28Q9P2N2 729 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 KCNG1Q9UIX4 513 aa25.81■■□□□ 1.72
LSM4-204ENST00000594828 RAD51AP2Q09MP3 1159 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 CUL4AQ13619 759 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 HFE2Q6ZVN8 426 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 BRAPQ7Z569 592 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 GPR149Q86SP6 731 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 GPR65Q8IYL9 337 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 NTPCRQ9BSD7 190 aaKnown RBP25.8■■□□□ 1.72
LSM4-204ENST00000594828 MRPL4Q9BYD3 311 aaKnown RBP25.8■■□□□ 1.72
LSM4-204ENST00000594828 MAN1C1Q9NR34 630 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.8■■□□□ 1.72
LSM4-204ENST00000594828 DPP7Q9UHL4 492 aa25.8■■□□□ 1.72
LSM4-204ENST00000594828 C2CD4DB7Z1M9 353 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 GLUD1P00367 558 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 NAB2Q15742 525 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 PTPN21Q16825 1174 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 ELMSAN1Q6PJG2 1045 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 ZBTB33Q86T24 672 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 FEZF2Q8TBJ5 459 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 RIN2Q8WYP3 895 aaPredicted RBP25.79■■□□□ 1.72
LSM4-204ENST00000594828 FAM122AQ96E09 287 aa25.79■■□□□ 1.72
LSM4-204ENST00000594828 SF3B1O75533 1304 aaKnown RBP eCLIP25.79■■□□□ 1.72
LSM4-204ENST00000594828 SLC16A4O15374 487 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 BMP15O95972 392 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 PLA2G4BP0C869 781 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 SLC12A3P55017 1021 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 TAS1R3Q7RTX0 852 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 PALB2Q86YC2 1186 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 HASPINQ8TF76 798 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 MFSD14AQ96MC6 490 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 TARS2Q9BW92 718 aaKnown RBP25.78■■□□□ 1.72
LSM4-204ENST00000594828 PTPRHQ9HD43 1115 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 KCND2Q9NZV8 630 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 FNIP2Q9P278 1114 aa25.78■■□□□ 1.72
LSM4-204ENST00000594828 VPS37CA5D8V6 355 aaPredicted RBP25.77■■□□□ 1.72
LSM4-204ENST00000594828 TMEM221A6NGB7 291 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 M0R296 226 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 SLC26A4O43511 780 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 KIF4AO95239 1232 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 PLS3P13797 630 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 PLA2G5P39877 138 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 UBA7P41226 1012 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 SMTNP53814 917 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 CREMQ03060 361 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 ZNF568Q3ZCX4 644 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 TMEM119Q4V9L6 283 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 C15orf39Q6ZRI6 1047 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 TDRD5Q8NAT2 981 aaKnown RBP25.77■■□□□ 1.72
LSM4-204ENST00000594828 SPIRE2Q8WWL2 714 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 TCHPQ9BT92 498 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 CCDC94Q9BW85 323 aaPredicted RBP25.77■■□□□ 1.72
LSM4-204ENST00000594828 CDT1Q9H211 546 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 USTQ9Y2C2 406 aa25.77■■□□□ 1.72
LSM4-204ENST00000594828 C1RP00736 705 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 MYBP10242 640 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 PDCP20941 246 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 GRM5P41594 1212 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 YARSP54577 528 aaKnown RBP25.76■■□□□ 1.71
LSM4-204ENST00000594828 SIGLEC14Q08ET2 396 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 SF3A1Q15459 793 aaKnown RBP25.76■■□□□ 1.71
LSM4-204ENST00000594828 GLRA4Q5JXX5 417 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 FAM171A1Q5VUB5 890 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 BMP8AQ7Z5Y6 402 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 GLYCTKQ8IVS8 523 aa25.76■■□□□ 1.71
LSM4-204ENST00000594828 PLCD3Q8N3E9 789 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms