RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ACO2Q99798 780 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 APOL6Q9BWW8 343 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 NXF3Q9H4D5 531 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 RC3H2Q9HBD1 1191 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 PTPRHQ9HD43 1115 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 PRMT7Q9NVM4 692 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
DDX39A-220ENST00000593008 UBE4BO95155 1302 aa10.55□□□□□ -0.72
DDX39A-220ENST00000593008 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 TBKBP1A7MCY6 615 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 FAM189A1O60320 539 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 PIGRP01833 764 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 ADRB2P07550 413 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 ATF7P17544 494 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-220ENST00000593008 PROZP22891 400 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 CASP4P49662 377 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 LIG4P49917 911 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 EFNA5P52803 228 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 POU5F1BQ06416 359 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 STRN3Q13033 797 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 PSMD2Q13200 908 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 KNOP1Q1ED39 458 aaKnown RBP10.54□□□□□ -0.72
DDX39A-220ENST00000593008 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 TTI2Q6NXR4 508 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 LRRC55Q6ZSA7 311 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 TRIML1Q8N9V2 468 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
DDX39A-220ENST00000593008 P2RX5Q93086 422 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 HCSTQ9UBK5 93 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 KCNG1Q9UIX4 513 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
DDX39A-220ENST00000593008 A0A1B0GUA9 196 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 NR3C1P04150 777 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 BMPR1AP36894 532 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 MATR3P43243 847 aaKnown RBP eCLIP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 ACOT2P49753 483 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 FAM189BP81408 668 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 SPAG1Q07617 926 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 PAK1Q13153 545 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 GPM6BQ13491 265 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 SCARA3Q6AZY7 606 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 CBWD2Q8IUF1 395 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 DHX40Q8IX18 779 aaKnown RBP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 CMTR2Q8IYT2 770 aaKnown RBP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 AOPEPQ8N6M6 819 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 PLEKHO2Q8TD55 490 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 KCNN1Q92952 543 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 HVCN1Q96D96 273 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 GBP3Q9H0R5 595 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
DDX39A-220ENST00000593008 ANO10Q9NW15 660 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 HSPBP1Q9NZL4 362 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 TNFSF13BQ9Y275 285 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 XIRP2A4UGR9 3374 aa10.53□□□□□ -0.72
DDX39A-220ENST00000593008 VCANP13611 3396 aa10.52□□□□□ -0.72
DDX39A-220ENST00000593008 TTC3P53804 2025 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 A0A0B4J269 797 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 H3BNC9 293 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 TULP1O00294 542 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 PSMA7O14818 248 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CCDC192P0DO97 292 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 POU3F3P20264 500 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 AKAP5P24588 427 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CCNE1P24864 410 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF445P59923 1031 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 ALCAMQ13740 583 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 NOLC1Q14978 699 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 NCAPHQ15003 741 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 COBLL1Q53SF7 1204 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CENPPQ6IPU0 288 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 MPZL3Q6UWV2 235 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CRELD2Q6UXH1 353 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 ZPBP2Q6X784 338 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 LUZP1Q86V48 1076 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 MLKLQ8NB16 471 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 POMGNT1Q8WZA1 660 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 SAMD11Q96NU1 681 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 FAM213AQ9BRX8 229 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 MSTO1Q9BUK6 570 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 HSD3B7Q9H2F3 369 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 CBX8Q9HC52 389 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms