RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 UBR3Q6ZT12 1888 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 TCP11X1B4DZS4 312 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 O00370 1275 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 TCEA3O75764 348 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 GJB6O95452 261 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 IBSPP21815 317 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 FMO1Q01740 532 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 CEP55Q53EZ4 464 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 KAT5Q92993 513 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 TBC1D31Q96DN5 1066 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 CD2APQ9Y5K6 639 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 ARHGEF35A5YM69 484 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 ATMINO43313 823 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 GDF11O95390 407 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 LRRC14Q15048 493 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 ACCSLQ4AC99 568 aa15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 POP1Q99575 1024 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-219ENST00000592604 A0A1B0GUA9 196 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 K7ENM7 598 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 TTC4O95801 387 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 CREB1P16220 341 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 IVDP26440 423 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 KCNJ2P63252 427 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 RASA3Q14644 834 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 MAB21L3Q8N8X9 362 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 BTBD6Q96KE9 485 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 LXNQ9BS40 222 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 ECT2Q9H8V3 914 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 LRRC4BQ9NT99 713 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 PRKAG3Q9UGI9 489 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 ARL2BPQ9Y2Y0 163 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 ACSL3O95573 720 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 CFBP00751 764 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 KCNA4P22459 653 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 SLC8A3P57103 927 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 COPS2P61201 443 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 KRT17Q04695 432 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 SYDE1Q6ZW31 735 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 PLEKHO2Q8TD55 490 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 C7orf43Q8WVR3 580 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 SHC3Q92529 594 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 STAMBPL1Q96FJ0 436 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 KREMEN1Q96MU8 473 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 ZNF577Q9BSK1 485 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 PLVAPQ9BX97 442 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 TMEM117Q9H0C3 514 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 LARSQ9P2J5 1176 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 SYNPO2Q9UMS6 1093 aa15.9■□□□□ 0.14
SMARCA4-219ENST00000592604 CYP26A1O43174 497 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 MKRN3Q13064 507 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 NUGGCQ68CJ6 796 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 ACCSQ96QU6 501 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 CBWD1Q9BRT8 395 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 ARHGEF3Q9NR81 526 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 TISP43B9A030 160 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 CLDN3O15551 220 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 CHKAP35790 457 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 MXI1P50539 228 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 JAG1P78504 1218 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 SGO2Q562F6 1265 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 SPATA21Q7Z572 469 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 SLC47A2Q86VL8 602 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 AGAP11Q8TF27 550 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 ZNF653Q96CK0 615 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 RSRC1Q96IZ7 334 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 C15orf41Q9Y2V0 281 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
SMARCA4-219ENST00000592604 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 ZNF536O15090 1300 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 A0A1W2PRG0 241 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 VIL1P09327 827 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 ARP10275 920 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 GBP2P32456 591 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 CLNS1AP54105 237 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 SNRPFP62306 86 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 CAV1Q03135 178 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 PTK6Q13882 451 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 MGARPQ8TDB4 240 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 SNF8Q96H20 258 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 RXFP1Q9HBX9 757 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 IGF2BP3O00425 579 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 ANP32DO95626 131 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 DLATP10515 647 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 MAN1A1P33908 653 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 MFAP3P55082 362 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 ASRGL1Q7L266 308 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 C1orf54Q8WWF1 131 aa15.88■□□□□ 0.13
SMARCA4-219ENST00000592604 EHMT1Q9H9B1 1298 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms