RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 RBM23Q86U06 439 aaKnown RBP15.92■□□□□ 0.14
DDX39A-217ENST00000592391 FAM178BQ8IXR5 827 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 VPS52Q8N1B4 723 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 EFHBQ8N7U6 833 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 DNAJC19Q96DA6 116 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 FIZ1Q96SL8 496 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 CDCA3Q99618 268 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-217ENST00000592391 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 ZBP1Q9H171 429 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 RCOR1Q9UKL0 485 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 TBX20Q9UMR3 447 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 PCDHA7Q9UN72 937 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 MYH11P35749 1972 aa15.92■□□□□ 0.14
DDX39A-217ENST00000592391 FSD2A1L4K1 749 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 HIDE1A8MVS5 230 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 PER2O15055 1255 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 LINC01565O15544 149 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 THP07101 528 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 BMP1P13497 986 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 LTBRP36941 435 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 BMS1Q14692 1282 aaKnown RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 E2F4Q16254 413 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 DUSP6Q16828 381 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 CEP120Q8N960 986 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 MRPL43Q8N983 215 aaKnown RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 ZBTB45Q96K62 511 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 CCDC94Q9BW85 323 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 VN1R3Q9BXE9 311 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 COL25A1Q9BXS0 654 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 MARCH5Q9NX47 278 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 ANKFY1Q9P2R3 1169 aa15.91■□□□□ 0.14
DDX39A-217ENST00000592391 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-217ENST00000592391 C2orf71A6NGG8 1288 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 H3BQ06 376 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 CLDN3O15551 220 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 TBX10O75333 385 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 CTSAP10619 480 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 GAP43P17677 238 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 NMT1P30419 496 aaKnown RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 YARSP54577 528 aaKnown RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 GTF2BQ00403 316 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 DLX2Q07687 328 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 MCL1Q07820 350 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 TUSC3Q13454 348 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 NOLC1Q14978 699 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 NAB2Q15742 525 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 SFR1Q86XK3 245 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 BICD1Q96G01 975 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 COLEC11Q9BWP8 271 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 CXCL16Q9H2A7 254 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 TNMDQ9H2S6 317 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 ST6GALNAC4Q9H4F1 302 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-217ENST00000592391 SEL1LQ9UBV2 794 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
DDX39A-217ENST00000592391 DLL1O00548 723 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 HNRNPDLO14979 420 aaKnown RBP15.89■□□□□ 0.13
DDX39A-217ENST00000592391 CXCL14O95715 111 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 GLP2RO95838 553 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 PIGRP01833 764 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 HARSP12081 509 aaKnown RBP15.89■□□□□ 0.13
DDX39A-217ENST00000592391 NDUFV1P49821 464 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 LIG4P49917 911 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 OSTNP61366 133 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 KRT85P78386 507 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 XKR4Q5GH76 650 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 RESP18Q5W5W9 173 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 MAP4K3Q8IVH8 894 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 IQUBQ8NA54 791 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 ADAMTS19Q8TE59 1207 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 DHX58Q96C10 678 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 ACAP3Q96P50 834 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 LRRC27Q9C0I9 530 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 KBTBD4Q9NVX7 518 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 FAM13BQ9NYF5 915 aa15.89■□□□□ 0.13
DDX39A-217ENST00000592391 TDRD15B5MCY1 1934 aaKnown RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 FRMD3A2A2Y4 597 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 F8W810 466 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 POLR2DO15514 142 aaKnown RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 EFEMP2O95967 443 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 SOD2P04179 222 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 CA8P35219 290 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 MATR3P43243 847 aaKnown RBP eCLIP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 KCNC3Q14003 757 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 ZC2HC1CQ53FD0 456 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 GLRA4Q5JXX5 417 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 PTCRAQ6ISU1 281 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 ZNF720Q7Z2F6 126 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 RNF168Q8IYW5 571 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 VN1R2Q8NFZ6 395 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 LEO1Q8WVC0 666 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-217ENST00000592391 AUTS2Q8WXX7 1259 aa15.88■□□□□ 0.13
DDX39A-217ENST00000592391 CHAMP1Q96JM3 812 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms