RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 FXR2P51116 673 aaKnown RBP eCLIP20.25■□□□□ 0.83
CIRBP-237ENST00000592234 TCF15Q12870 199 aa20.25■□□□□ 0.83
CIRBP-237ENST00000592234 NBR1Q14596 966 aa20.25■□□□□ 0.83
CIRBP-237ENST00000592234 PALB2Q86YC2 1186 aa20.25■□□□□ 0.83
CIRBP-237ENST00000592234 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.25■□□□□ 0.833e-7■■□□□ 13.8
CIRBP-237ENST00000592234 SNTG2Q9NY99 539 aa20.25■□□□□ 0.83
CIRBP-237ENST00000592234 LRWD1Q9UFC0 647 aa20.25■□□□□ 0.83
CIRBP-237ENST00000592234 ACKR2O00590 384 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 SPATA31D3P0C874 917 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 TUSC3Q13454 348 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 HSP90AA2PQ14568 343 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-237ENST00000592234 ECM1Q16610 540 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 SPATA31D4Q6ZUB0 917 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 GLYCTKQ8IVS8 523 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 RIN2Q8WYP3 895 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-237ENST00000592234 IFT74Q96LB3 600 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 CCDC113Q9H0I3 377 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 BHMT2Q9H2M3 363 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 CACNG4Q9UBN1 327 aa20.24■□□□□ 0.83
CIRBP-237ENST00000592234 DOCK8Q8NF50 2099 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 CASTOR2A6NHX0 329 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 RFPL2O75678 378 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 RECQL4O94761 1208 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 THP07101 528 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 CREMQ03060 361 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 CYP26C1Q6V0L0 522 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 GPR65Q8IYL9 337 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 HASPINQ8TF76 798 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 HDAC7Q8WUI4 952 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 PHOX2BQ99453 314 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 PAAF1Q9BRP4 392 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 KIFC3Q9BVG8 833 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 RAB34Q9BZG1 259 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 PLEKHA4Q9H4M7 779 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 POLD4Q9HCU8 107 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 FNIP2Q9P278 1114 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 KIAA1024Q9UPX6 916 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 USP20Q9Y2K6 914 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 STK24Q9Y6E0 443 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 SF3B1O75533 1304 aaKnown RBP eCLIP20.23■□□□□ 0.836e-7■■■■□ 24.7
CIRBP-237ENST00000592234 MYH11P35749 1972 aa20.23■□□□□ 0.83
CIRBP-237ENST00000592234 VWA8A3KMH1 1905 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 PTGESO14684 152 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 TGM5O43548 720 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 EDN1P05305 212 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.832e-10■□□□□ 10.9
CIRBP-237ENST00000592234 GBP2P32456 591 aaPredicted RBP20.22■□□□□ 0.83
CIRBP-237ENST00000592234 PDIA5Q14554 519 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 SNX29Q8TEQ0 813 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 SMG7Q92540 1137 aaKnown RBP20.22■□□□□ 0.83
CIRBP-237ENST00000592234 STAMQ92783 540 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 KIFAP3Q92845 792 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 TBC1D32Q96NH3 1257 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 RHOBTB2Q9BYZ6 727 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 MFSD1Q9H3U5 465 aa20.22■□□□□ 0.83
CIRBP-237ENST00000592234 WDR6Q9NNW5 1121 aaKnown RBP20.22■□□□□ 0.83
CIRBP-237ENST00000592234 DDX19AQ9NUU7 478 aaKnown RBP20.22■□□□□ 0.83
CIRBP-237ENST00000592234 DOCK6Q96HP0 2047 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 C1RP00736 705 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 RPL17P18621 184 aaKnown RBP20.21■□□□□ 0.83
CIRBP-237ENST00000592234 EFNA5P52803 228 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 NUBP1P53384 320 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 PTGDRQ13258 359 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 TDGQ13569 410 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 DCAF4L1Q3SXM0 396 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 EEF1DP3Q658K8 133 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 PIDD1Q9HB75 910 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 CLUHO75153 1309 aa20.21■□□□□ 0.83
CIRBP-237ENST00000592234 KIF4AO95239 1232 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 TOB1P50616 345 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-237ENST00000592234 RTP2Q5QGT7 225 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 PRSS55Q6UWB4 352 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-237ENST00000592234 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 IGSF22Q8N9C0 903 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 TTPALQ9BTX7 342 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 NT5C3AQ9H0P0 336 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 CXCL16Q9H2A7 254 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 ZDHHC7Q9NXF8 308 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 IGSF9Q9P2J2 1179 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 CITO14578 2027 aa20.2■□□□□ 0.82
CIRBP-237ENST00000592234 N4BP1O75113 896 aaKnown RBP20.19■□□□□ 0.82
CIRBP-237ENST00000592234 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 FAM171A1Q5VUB5 890 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 KRT79Q5XKE5 535 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 LILRA6Q6PI73 481 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-237ENST00000592234 TMEM105Q8N8V8 129 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 ATOH1Q92858 354 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-237ENST00000592234 ZNF707Q96C28 371 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-237ENST00000592234 FAM86C1Q9NVL1 165 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-237ENST00000592234 DUSP12Q9UNI6 340 aa20.19■□□□□ 0.82
CIRBP-237ENST00000592234 CCDC169A6NNP5 214 aa20.18■□□□□ 0.82
CIRBP-237ENST00000592234 E9PMD0 336 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms