RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 KCNA5P22460 613 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 ZNF131P52739 623 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 NCKAP1LP55160 1127 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 ERVFC1P60507 584 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 GRIK3Q13003 919 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 DDX53Q86TM3 631 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 SFR1Q86XK3 245 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 VPS52Q8N1B4 723 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 LEO1Q8WVC0 666 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 STAMQ92783 540 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 ACAP3Q96P50 834 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 CDT1Q9H211 546 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 UBE2ZQ9H832 354 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 MRPL44Q9H9J2 332 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 PANK4Q9NVE7 773 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 SEL1LQ9UBV2 794 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 TBX20Q9UMR3 447 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 EXOC7Q9UPT5 735 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 ZDHHC9Q9Y397 364 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 A0A087X0B3 334 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 GOLGA6L4A6NEF3 574 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 PER2O15055 1255 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 TADA2AO75478 443 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 GCNT3O95395 438 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 SRGAP2BP0DMP2 458 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 GRM5P41594 1212 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 NDUFV1P49821 464 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 ASIC1P78348 528 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 TFF2Q03403 129 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 HYAL1Q12794 435 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 CAMK1Q14012 370 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 NOLC1Q14978 699 aaKnown RBP eCLIP11.02□□□□□ -0.65
BRCA1-227ENST00000591849 KYAT1Q16773 422 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 COLGALT2Q8IYK4 626 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 PABPC5Q96DU9 382 aaKnown RBP11.02□□□□□ -0.65
BRCA1-227ENST00000591849 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-227ENST00000591849 CDCA3Q99618 268 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-227ENST00000591849 TNMDQ9H2S6 317 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 MAGEF1Q9HAY2 307 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
BRCA1-227ENST00000591849 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-227ENST00000591849 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 H3BQ06 376 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-227ENST00000591849 INPPL1O15357 1258 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
BRCA1-227ENST00000591849 TUSC3Q13454 348 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ZC2HC1CQ53FD0 456 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-227ENST00000591849 GLRA4Q5JXX5 417 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 AXDND1Q5T1B0 1012 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-227ENST00000591849 RESP18Q5W5W9 173 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 SLFN12LQ6IEE8 588 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ZNF720Q7Z2F6 126 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ADGRD2Q7Z7M1 963 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ACCSQ96QU6 501 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 PTPRHQ9HD43 1115 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 FAM50BQ9Y247 325 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 SSX2IPQ9Y2D8 614 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
BRCA1-227ENST00000591849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 C2CD2LO14523 706 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 FSCN2O14926 492 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 URODP06132 367 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CLTAP09496 248 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CMA1P23946 247 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 KLRC2P26717 231 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 GTF2F1P35269 517 aaKnown RBP eCLIP11□□□□□ -0.654e-8■■■□□ 16.5
BRCA1-227ENST00000591849 AFMP43652 599 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 GTF2BQ00403 316 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 MCL1Q07820 350 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 DSC1Q08554 894 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 ADAM15Q13444 863 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 ALCAMQ13740 583 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 HSP90AA2PQ14568 343 aaPredicted RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 POSTNQ15063 836 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 CLUL1Q15846 466 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 DUSP6Q16828 381 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
BRCA1-227ENST00000591849 SEZ6Q53EL9 994 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 ADALQ6DHV7 355 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 LLGL2Q6P1M3 1020 aa11□□□□□ -0.65
BRCA1-227ENST00000591849 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms