RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 STBD1O95210 358 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 URODP06132 367 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 ADH1AP07327 375 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 ITGA4P13612 1032 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 EPCAMP16422 314 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 SLC11A1P49279 550 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 MCCD1P59942 119 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 FOXK2Q01167 660 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 TDGQ13569 410 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 NCOA4Q13772 614 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 TFDP1Q14186 410 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 PTPN14Q15678 1187 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 INF2Q27J81 1249 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 LONRF3Q496Y0 759 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 MRPL10Q7Z7H8 261 aaKnown RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 GPR149Q86SP6 731 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 C4orf19Q8IY42 314 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 C12orf76Q8N812 135 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 PRPF31Q8WWY3 499 aaKnown RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 WASF1Q92558 559 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 GJA10Q969M2 543 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
BRCA1-226ENST00000591534 CEP89Q96ST8 783 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 SH2D3AQ9BRG2 576 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 TM6SF1Q9BZW5 370 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 BRMS1Q9HCU9 246 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 IGSF9Q9P2J2 1179 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 FBXL21Q9UKT6 434 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 PLXNA4Q9HCM2 1894 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 ATG2AQ2TAZ0 1938 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 TMEM150BA6NC51 233 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 PROB1E7EW31 1015 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 M0R2N6 131 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 EDIL3O43854 480 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 CCNT1O60563 726 aaKnown RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 C1RP00736 705 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 SOD2P04179 222 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 YWHABP31946 246 aaKnown RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 CLCN4P51793 760 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 CREMQ03060 361 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 LAMTOR4Q0VGL1 99 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 STK3Q13188 491 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 EPHA7Q15375 998 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 PLA2G4FQ68DD2 849 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 NOTUMQ6P988 496 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 TMEM173Q86WV6 379 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 KSR1Q8IVT5 923 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 CMASQ8NFW8 434 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 AUTS2Q8WXX7 1259 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 NXPE3Q969Y0 559 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 KLHL5Q96PQ7 755 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 RTP3Q9BQQ7 232 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 COLEC11Q9BWP8 271 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 TRIM6Q9C030 488 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 DHX33Q9H6R0 707 aaKnown RBP10.49□□□□□ -0.73
BRCA1-226ENST00000591534 IFT122Q9HBG6 1241 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
BRCA1-226ENST00000591534 NRP1O14786 923 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 GLUD1P00367 558 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 PDGFBP01127 241 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-226ENST00000591534 POMCP01189 267 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 SSBP05455 408 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-226ENST00000591534 ASGR2P07307 311 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 CNPP09543 421 aaKnown RBP10.48□□□□□ -0.73
BRCA1-226ENST00000591534 WEE2P0C1S8 567 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 OR1G1P47890 313 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 AK2P54819 239 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 NPEPPSP55786 919 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 SKOR1P84550 965 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 POU5F1BQ06416 359 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 EMC2Q15006 297 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 XKR9Q5GH70 373 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 AGMOQ6ZNB7 445 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 FERMT3Q86UX7 667 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 ZNF280BQ86YH2 543 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 RNF149Q8NC42 400 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 FLCNQ8NFG4 579 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 HDAC7Q8WUI4 952 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 TMEM143Q96AN5 459 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 AIFM3Q96NN9 605 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 RPS6KC1Q96S38 1066 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 LXNQ9BS40 222 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 RHOBTB2Q9BYZ6 727 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 KCNMB3Q9NPA1 279 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-226ENST00000591534 PDRG1Q9NUG6 133 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 VAV3Q9UKW4 847 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 WDR81Q562E7 1941 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 MYH9P35579 1960 aaKnown RBP10.48□□□□□ -0.73
BRCA1-226ENST00000591534 EVPLQ92817 2033 aa10.48□□□□□ -0.73
BRCA1-226ENST00000591534 LOXHD1Q8IVV2 1947 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 EML1O00423 815 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms