RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 PSMD6Q15008 389 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 TRIM65Q6PJ69 517 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 RRAGAQ7L523 313 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 RNF180Q86T96 592 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 DIS3LQ8TF46 1054 aaKnown RBP19.64■□□□□ 0.73
CTDP1-205ENST00000590599 DNAJB3Q8WWF6 145 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 FNBP1Q96RU3 617 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 NLRC4Q9NPP4 1024 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 GTF2IRD1Q9UHL9 959 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 TNFSF13BQ9Y275 285 aa19.64■□□□□ 0.73
CTDP1-205ENST00000590599 RANBP2P49792 3224 aaKnown RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 SOWAHDA6NJG2 315 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 ABLIM1O14639 778 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 OGTO15294 1046 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 TFRCP02786 760 aaKnown RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 AMHR2Q16671 573 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 FAM47CQ5HY64 1035 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 ZBTB41Q5SVQ8 909 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 KLHDC7AQ5VTJ3 777 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 TAF2Q6P1X5 1199 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 CRELD2Q6UXH1 353 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 BAP1Q92560 729 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 INTS2Q9H0H0 1204 aaKnown RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 NUCKS1Q9H1E3 243 aaKnown RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 ADAMTS10Q9H324 1103 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 HMX1Q9NP08 348 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-205ENST00000590599 PCDH10Q9P2E7 1040 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 CEP290O15078 2479 aa19.63■□□□□ 0.73
CTDP1-205ENST00000590599 LRRC53A6NM62 1247 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 GPR32O75388 356 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 GTF2H1P32780 548 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 PDXDC1Q6P996 788 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 TMEM117Q9H0C3 514 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 TMEM8AQ9HCN3 771 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 RRAGDQ9NQL2 400 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-205ENST00000590599 PMM2O15305 246 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 UCHL3P15374 230 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 KRT39Q6A163 491 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 CCSAPQ6IQ19 270 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-205ENST00000590599 UBE2Q1Q7Z7E8 422 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 ZNF710Q8N1W2 664 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 NME8Q8N427 588 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 POP1Q99575 1024 aaKnown RBP19.62■□□□□ 0.73
CTDP1-205ENST00000590599 SIX2Q9NPC8 291 aa19.62■□□□□ 0.73
CTDP1-205ENST00000590599 TOPORSQ9NS56 1045 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-205ENST00000590599 FAM189A1O60320 539 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 TSPAN1O60635 241 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 MEA1Q16626 185 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 SEZ6Q53EL9 994 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 EEF1DP3Q658K8 133 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 DPY19L2P1Q6NXN4 242 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-205ENST00000590599 BRSK2Q8IWQ3 736 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 OSMRQ99650 979 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 CDT1Q9H211 546 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 FBXL5Q9UKA1 691 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 PLAGL2Q9UPG8 496 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 FHOD1Q9Y613 1164 aa19.61■□□□□ 0.73
CTDP1-205ENST00000590599 CABYRO75952 493 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 ARF4P18085 180 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 TNNI1P19237 187 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 HNRNPH3P31942 346 aaKnown RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 PCBP1Q15365 356 aaKnown RBP eCLIP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 EPC2Q52LR7 807 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 E4F1Q66K89 784 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 WDR59Q6PJI9 974 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CCAR2Q8N163 923 aaKnown RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 EHBP1Q8NDI1 1231 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CPB2Q96IY4 423 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 SPAG5Q96R06 1193 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CRISPLD2Q9H0B8 497 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 PDZD7Q9H5P4 517 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 PDE11AQ9HCR9 933 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 SPTLC3Q9NUV7 552 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 DAAM1Q9Y4D1 1078 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CCP110O43303 1012 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 MCF2P10911 925 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 DARSP14868 501 aaKnown RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 TNFSF9P41273 254 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 MNX1P50219 401 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CLDN10P78369 228 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 RAPGEF1Q13905 1077 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 MTF1Q14872 753 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 SFMBT2Q5VUG0 894 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 GDF6Q6KF10 455 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 RAD9BQ6WBX8 426 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CATSPER4Q7RTX7 472 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 SESTD1Q86VW0 696 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 THNSL1Q8IYQ7 743 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 VTI1AQ96AJ9 217 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CHP1Q99653 195 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 APEX2Q9UBZ4 518 aa19.6■□□□□ 0.73
CTDP1-205ENST00000590599 CPSF3Q9UKF6 684 aaKnown RBP19.6■□□□□ 0.73
CTDP1-205ENST00000590599 RFX1P22670 979 aa19.59■□□□□ 0.73
CTDP1-205ENST00000590599 CDK17Q00537 523 aa19.59■□□□□ 0.73
CTDP1-205ENST00000590599 IQCEQ6IPM2 695 aa19.59■□□□□ 0.73
CTDP1-205ENST00000590599 TOGARAM2Q6ZUX3 1019 aa19.59■□□□□ 0.73
CTDP1-205ENST00000590599 RSPH3Q86UC2 560 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms