RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 PTTG2Q9NZH5 202 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TBC1D7Q9P0N9 293 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 GRID1Q9ULK0 1009 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TMEM98Q9Y2Y6 226 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 RIC1Q4ADV7 1423 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 ADGRA3Q8IWK6 1321 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 CYP2D7A0A087X1C5 515 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 A0A0A6YYK5 440 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 FAM47DPA6NHR8 397 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 PODXLO00592 558 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 VCAM1P19320 739 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 POLD1P28340 1107 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 CHRNA3P32297 505 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 GPSM2P81274 684 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 MAP3K10Q02779 954 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 GSTM4Q03013 218 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 CDC16Q13042 620 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TMED2Q15363 201 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 ZNF568Q3ZCX4 644 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 SLC45A4Q5BKX6 768 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 LRRC8BQ6P9F7 803 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 RBM44Q6ZP01 1051 aaKnown RBP8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TRIM67Q6ZTA4 783 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 PHLDB2Q86SQ0 1253 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TTLL11Q8NHH1 800 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 SDR42E1Q8WUS8 393 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 PRR11Q96HE9 360 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 ABHD8Q96I13 439 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 FAM81BQ96LP2 452 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 TSPAN18Q96SJ8 248 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 SAR1AQ9NR31 198 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 PLSCR2Q9NRY7 297 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 PCDHA4Q9UN74 947 aa8.23□□□□□ -1.09
NEDD4L-229ENST00000590506 KIF13AQ9H1H9 1805 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 RASA4BC9J798 803 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 VILLO15195 856 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 MAGEB2O15479 319 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 RASA4O43374 803 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 RGS2P41220 211 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 EMP3P54852 163 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 FKBP3Q00688 224 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 ISLR2Q6UXK2 745 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 C3orf67Q6ZVT6 689 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CCDC80Q76M96 950 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 OTOAQ7RTW8 1153 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 TRIM59Q8IWR1 403 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 KCNN1Q92952 543 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 PTCD3Q96EY7 689 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 FAM161BQ96MY7 647 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 PWWP2AQ96N64 755 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 BTBD7Q9P203 1132 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 AJAP1Q9UKB5 411 aaPredicted RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 PCDHA6Q9UN73 950 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 DIS3Q9Y2L1 958 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 PCDHA8Q9Y5H6 950 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 SMIM31A0A1B0GVY4 71 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 TCRBV7S2A1N4TA0A589 114 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 TMEM247A6NEH6 219 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 IRS4O14654 1257 aaPredicted RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 THAP12O43422 761 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 NMT2O60551 498 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 HAUS5O94927 633 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 UQCRFS1P1P0C7P4 283 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 ALAS1P13196 640 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 UCHL3P15374 230 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CALML3P27482 149 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CETN2P41208 172 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CPA2P48052 419 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 MARCKSL1P49006 195 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 NPEPPSP55786 919 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CALCOCO2Q13137 446 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 LLGL1Q15334 1064 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 LRRC36Q1X8D7 754 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 TMEM53Q6P2H8 277 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 B3GNT6Q6ZMB0 384 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 TSHZ1Q6ZSZ6 1077 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 RAPH1Q70E73 1250 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 SYNE4Q8N205 404 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 SPATA5Q8NB90 893 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 RFWD2Q8NHY2 731 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 C7orf43Q8WVR3 580 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 GAB3Q8WWW8 586 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 DGCR14Q96DF8 476 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 CALML4Q96GE6 196 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 NSL1Q96IY1 281 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 PCYOX1Q9UHG3 505 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 NENFQ9UMX5 172 aa8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 R3HDM2Q9Y2K5 976 aaKnown RBP8.22□□□□□ -1.09
NEDD4L-229ENST00000590506 C2CD2LO14523 706 aa8.21□□□□□ -1.09
NEDD4L-229ENST00000590506 PLSCR1O15162 318 aa8.21□□□□□ -1.09
NEDD4L-229ENST00000590506 HNRNPCL1O60812 293 aaKnown RBP8.21□□□□□ -1.09
NEDD4L-229ENST00000590506 ZWINTO95229 277 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms