RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 INPPL1O15357 1258 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 OFD1O75665 1012 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 EDN1P05305 212 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 TFF2Q03403 129 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 PPP2R5AQ15172 486 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 CABP7Q86V35 215 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 MRPL9Q9BYD2 267 aaKnown RBP12.38□□□□□ -0.43
SMAD4-211ENST00000590499 NT5C3AQ9H0P0 336 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 C2orf40Q9H1Z8 148 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-211ENST00000590499 COG5Q9UP83 839 aa12.38□□□□□ -0.43
SMAD4-211ENST00000590499 TDRD15B5MCY1 1934 aaKnown RBP12.38□□□□□ -0.43
SMAD4-211ENST00000590499 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
SMAD4-211ENST00000590499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 B4GALT3O60512 393 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 HIP1RO75146 1068 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 FGF18O76093 207 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 GUCY2CP25092 1073 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 IRS1P35568 1242 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 PBX3P40426 434 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 AFF1P51825 1210 aaKnown RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 UBE3AQ05086 875 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 LONRF3Q496Y0 759 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 NOMO2Q5JPE7 1267 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 SYT2Q8N9I0 419 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 CNNM3Q8NE01 707 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 PGBD4Q96DM1 585 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 FBXO2Q9UK22 296 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-211ENST00000590499 IPPQ9Y573 584 aa12.37□□□□□ -0.43
SMAD4-211ENST00000590499 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 ACKR2O00590 384 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 FSCN2O14926 492 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 LILRB3O75022 631 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 PRKCBP05771 671 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 PPM1AP35813 382 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
SMAD4-211ENST00000590499 MAPK6Q16659 721 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-211ENST00000590499 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 SLC39A11Q8N1S5 342 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 TSC1Q92574 1164 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 IFT74Q96LB3 600 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 PLIN2Q99541 437 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 TIPINQ9BVW5 301 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-211ENST00000590499 CCSER1Q9C0I3 900 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
SMAD4-211ENST00000590499 PDZD7Q9H5P4 517 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-211ENST00000590499 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 BLOC1S4Q9NUP1 217 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 LZTS1Q9Y250 596 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 HES2Q9Y543 173 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 TRIP11Q15643 1979 aa12.36□□□□□ -0.43
SMAD4-211ENST00000590499 PLA2G4BP0C869 781 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 ITGA4P13612 1032 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 MARCKSP29966 332 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-211ENST00000590499 UBA7P41226 1012 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 NPTX2P47972 431 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-211ENST00000590499 EFNA5P52803 228 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 PEX3P56589 373 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 BCAR1P56945 870 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
SMAD4-211ENST00000590499 HYAL1Q12794 435 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
SMAD4-211ENST00000590499 ARSHQ5FYA8 562 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 TAS1R3Q7RTX0 852 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
SMAD4-211ENST00000590499 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 ZNF511Q8NB15 262 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 GSTCDQ8NEC7 633 aa12.35□□□□□ -0.43
SMAD4-211ENST00000590499 MRPS27Q92552 414 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms