RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 RPF1Q9H9Y2 349 aaKnown RBP14.03□□□□□ -0.16
DDX39A-213ENST00000590315 PTPRHQ9HD43 1115 aa14.03□□□□□ -0.16
DDX39A-213ENST00000590315 UBN1Q9NPG3 1134 aa14.03□□□□□ -0.16
DDX39A-213ENST00000590315 TOPORSQ9NS56 1045 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-213ENST00000590315 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
DDX39A-213ENST00000590315 INSL6Q9Y581 213 aa14.03□□□□□ -0.16
DDX39A-213ENST00000590315 COL4A6Q14031 1691 aa14.03□□□□□ -0.16
DDX39A-213ENST00000590315 ZNF623O75123 536 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 DGKIO75912 1065 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 POMCP01189 267 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 CXCL8P10145 99 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 GARTP22102 1010 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 HOXD13P35453 343 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 PBX2P40425 430 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 PPP1R2P41236 205 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 TNFSF9P41273 254 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 PPP2R3AQ06190 1150 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 KYAT1Q16773 422 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
DDX39A-213ENST00000590315 NOMO2Q5JPE7 1267 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 AGMOQ6ZNB7 445 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.17
DDX39A-213ENST00000590315 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 FIBCD1Q8N539 461 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 TMEM117Q9H0C3 514 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 NKX2-4Q9H2Z4 354 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 AGPAT3Q9NRZ7 376 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 RNF19AQ9NV58 838 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.17
DDX39A-213ENST00000590315 A0A0B4J269 797 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 LCHNA4D1U4 455 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 ARL5CA6NH57 179 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 ABLIM1O14639 778 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 TGFB1I1O43294 461 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 EXOC3O60645 756 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
DDX39A-213ENST00000590315 NR3C1P04150 777 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 CA3P07451 260 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 CLTAP09496 248 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 SCNN1GP51170 649 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 STX17P56962 302 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 PPP2R2DQ66LE6 453 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
DDX39A-213ENST00000590315 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 GPD1LQ8N335 351 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 RDH13Q8NBN7 331 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 NELFBQ8WX92 580 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 ZFP42Q96MM3 310 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 MRPL9Q9BYD2 267 aaKnown RBP14.01□□□□□ -0.17
DDX39A-213ENST00000590315 PBX4Q9BYU1 374 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
DDX39A-213ENST00000590315 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
DDX39A-213ENST00000590315 TRIM49BA6NDI0 452 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 PDXKO00764 312 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 KIAA0391O15091 583 aaKnown RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 EXTL3O43909 919 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 ZC3H11AO75152 810 aaKnown RBP eCLIP14□□□□□ -0.17
DDX39A-213ENST00000590315 OFD1O75665 1012 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 NR2F2P24468 414 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 DNAJB2P25686 324 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 ADSSP30520 456 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 NLRP12P59046 1061 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 SNRPFP62306 86 aaKnown RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 SPAG1Q07617 926 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 PAK1Q13153 545 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 HSP90AA2PQ14568 343 aaPredicted RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 TPD52L1Q16890 204 aaPredicted RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 ADSSL1Q8N142 457 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 XXYLT1Q8NBI6 393 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 P2RX5Q93086 422 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 TIFAQ96CG3 184 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 SNX27Q96L92 541 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 CASD1Q96PB1 797 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 KCTD10Q9H3F6 313 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 SLC28A3Q9HAS3 691 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 RBAKQ9NYW8 714 aaPredicted RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 HCSTQ9UBK5 93 aa14□□□□□ -0.17
DDX39A-213ENST00000590315 YBX2Q9Y2T7 364 aaKnown RBP14□□□□□ -0.17
DDX39A-213ENST00000590315 TRIOBPQ9H2D6 2365 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 BICDL2A1A5D9 508 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 CLSTN1O94985 981 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 CCNE1P24864 410 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 RPL13P26373 211 aaKnown RBP13.99□□□□□ -0.17
DDX39A-213ENST00000590315 CTNNB1P35222 781 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 HTRA4P83105 476 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-213ENST00000590315 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
DDX39A-213ENST00000590315 GRIK3Q13003 919 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 STX1AQ16623 288 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 DPCR1Q3MIW9 517 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 ZSWIM2Q8NEG5 633 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 DHTKD1Q96HY7 919 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-213ENST00000590315 SEMA6BQ9H3T3 888 aa13.99□□□□□ -0.17
DDX39A-213ENST00000590315 CERS4Q9HA82 394 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms