RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RIN2Q8WYP3 895 aaPredicted RBP19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 RABGGTAQ92696 567 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 STAMQ92783 540 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 B3GALT6Q96L58 329 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 IFT74Q96LB3 600 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 MFSD1Q9H3U5 465 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 PDZD7Q9H5P4 517 aa19.81■□□□□ 0.76
PRKCSH-211ENST00000590098 SF3B1O75533 1304 aaKnown RBP eCLIP19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 ACKR2O00590 384 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 C1RP00736 705 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 SPATA31D3P0C874 917 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 FXR2P51116 673 aaKnown RBP eCLIP19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 TDGQ13569 410 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 SPATA31D4Q6ZUB0 917 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 BSNDQ8WZ55 320 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 PLEKHA4Q9H4M7 779 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 PIDD1Q9HB75 910 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 SNTG2Q9NY99 539 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 FNIP2Q9P278 1114 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 LRWD1Q9UFC0 647 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 STK24Q9Y6E0 443 aa19.8■□□□□ 0.76
PRKCSH-211ENST00000590098 TTLL13PA6NNM8 815 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 THP07101 528 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 EFNA5P52803 228 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 GLYCTKQ8IVS8 523 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 SMG7Q92540 1137 aaKnown RBP19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 KIFAP3Q92845 792 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 RHOBTB2Q9BYZ6 727 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 RAB34Q9BZG1 259 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 KCNK12Q9HB15 430 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 WDR6Q9NNW5 1121 aaKnown RBP19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 FAM86C1Q9NVL1 165 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 KIAA1024Q9UPX6 916 aa19.79■□□□□ 0.76
PRKCSH-211ENST00000590098 CASTOR2A6NHX0 329 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 TGM5O43548 720 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 RFPL2O75678 378 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 RECQL4O94761 1208 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 GBP2P32456 591 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 PDIA5Q14554 519 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 NBR1Q14596 966 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 ATOH1Q92858 354 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 CCDC113Q9H0I3 377 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 BHMT2Q9H2M3 363 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 IGSF9Q9P2J2 1179 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 CACNG4Q9UBN1 327 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 ZFHX2Q9C0A1 2572 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-211ENST00000590098 CLUHO75153 1309 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 USP34Q70CQ2 3546 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 RPL17P18621 184 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 PTGDRQ13258 359 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 ECM1Q16610 540 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 DCAF4L1Q3SXM0 396 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 ASTLQ6HA08 431 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 APBB1IPQ7Z5R6 666 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 C4orf32Q8N8J7 132 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 SNX29Q8TEQ0 813 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 HASPINQ8TF76 798 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 PAAF1Q9BRP4 392 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 POLD4Q9HCU8 107 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 DDX19AQ9NUU7 478 aaKnown RBP19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 ZDHHC7Q9NXF8 308 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 GDAQ9Y2T3 454 aa19.77■□□□□ 0.76
PRKCSH-211ENST00000590098 K7ERI5 159 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 PTGESO14684 152 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 GALR2O43603 387 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 KIF4AO95239 1232 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 U2AF2P26368 475 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 CLCN5P51795 746 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 RTP2Q5QGT7 225 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 FAM171A1Q5VUB5 890 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 LILRA6Q6PI73 481 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 PRSS55Q6UWB4 352 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 CEP57Q86XR8 500 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 TMEM105Q8N8V8 129 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 TTPALQ9BTX7 342 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 NT5C3AQ9H0P0 336 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 FBXL21Q9UKT6 434 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 DUSP12Q9UNI6 340 aa19.76■□□□□ 0.75
PRKCSH-211ENST00000590098 TRIP11Q15643 1979 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 H0Y858 1186 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 ELAVL2Q12926 359 aaKnown RBP19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 ATF7IP2Q5U623 682 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 KRT79Q5XKE5 535 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 EEF1DP3Q658K8 133 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 FLCNQ8NFG4 579 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 ZNF707Q96C28 371 aaPredicted RBP19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 PRKD2Q9BZL6 878 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 DNM3Q9UQ16 869 aa19.75■□□□□ 0.75
PRKCSH-211ENST00000590098 DOCK8Q8NF50 2099 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 CCDC169A6NNP5 214 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 LAD1O00515 517 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 N4BP1O75113 896 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 EDN1P05305 212 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 TOB1P50616 345 aaPredicted RBP19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 PSMD5Q16401 504 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 NT5DC1Q5TFE4 455 aa19.74■□□□□ 0.75
PRKCSH-211ENST00000590098 PDXDC1Q6P996 788 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms