RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 MRE11P49959 708 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 MTMR3Q13615 1198 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 PALB2Q86YC2 1186 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 HASPINQ8TF76 798 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 ZNF707Q96C28 371 aaPredicted RBP19.89■□□□□ 0.77
H3F3B-209ENST00000589949 C2orf40Q9H1Z8 148 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 DDX19AQ9NUU7 478 aaKnown RBP19.89■□□□□ 0.77
H3F3B-209ENST00000589949 ZMYM2Q9UBW7 1377 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 LRWD1Q9UFC0 647 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 KIAA1024Q9UPX6 916 aa19.89■□□□□ 0.77
H3F3B-209ENST00000589949 CCDC195A0A1B0GUA6 201 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 N4BP3O15049 544 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 CD2BP2O95400 341 aaKnown RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 MUTP22033 750 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 TUSC3Q13454 348 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 GNL2Q13823 731 aaKnown RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 MAPK6Q16659 721 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 RTP2Q5QGT7 225 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 LILRA6Q6PI73 481 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 PRSS55Q6UWB4 352 aaPredicted RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 C15orf39Q6ZRI6 1047 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 GLYCTKQ8IVS8 523 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 UBALD2Q8IYN6 164 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 DAW1Q8N136 415 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 CMASQ8NFW8 434 aaPredicted RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 DEPTORQ8TB45 409 aa19.88■□□□□ 0.77
H3F3B-209ENST00000589949 RIN2Q8WYP3 895 aaPredicted RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 MMTAG2Q9BU76 263 aaKnown RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 NOL7Q9UMY1 257 aaKnown RBP19.88■□□□□ 0.77
H3F3B-209ENST00000589949 SPDYE4A6NLX3 237 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 E9PMD0 336 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 TGM5O43548 720 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 NR1I2O75469 434 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 KIF4AO95239 1232 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 GLUD1P00367 558 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 PDIA5Q14554 519 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 HSP90AA2PQ14568 343 aaPredicted RBP19.87■□□□□ 0.77
H3F3B-209ENST00000589949 USP41Q3LFD5 358 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 HAUS3Q68CZ6 603 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 CCDC149Q6ZUS6 474 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 PLCD3Q8N3E9 789 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 SSX2IPQ9Y2D8 614 aa19.87■□□□□ 0.77
H3F3B-209ENST00000589949 PAPLNO95428 1278 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 MAPK7Q13164 816 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 TAS1R3Q7RTX0 852 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 SNX29Q8TEQ0 813 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 RUSC1Q9BVN2 902 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 FNIP2Q9P278 1114 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 GDAQ9Y2T3 454 aa19.86■□□□□ 0.77
H3F3B-209ENST00000589949 ADAM12O43184 909 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 TADA2AO75478 443 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 PPP2R5AQ15172 486 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 TMEM132AQ24JP5 1023 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 CD300LGQ6UXG3 332 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 OTOP3Q7RTS5 596 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 GPR65Q8IYL9 337 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 TMEM105Q8N8V8 129 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 CEP120Q8N960 986 aa19.85■□□□□ 0.77
H3F3B-209ENST00000589949 WDR6Q9NNW5 1121 aaKnown RBP19.85■□□□□ 0.77
H3F3B-209ENST00000589949 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.85■□□□□ 0.77
H3F3B-209ENST00000589949 THP07101 528 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 NPTX2P47972 431 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 GLRA4Q5JXX5 417 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 ATF7IP2Q5U623 682 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 LNX1Q8TBB1 728 aaPredicted RBP19.84■□□□□ 0.77
H3F3B-209ENST00000589949 RSAD2Q8WXG1 361 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 SMG7Q92540 1137 aaKnown RBP19.84■□□□□ 0.77
H3F3B-209ENST00000589949 KIFAP3Q92845 792 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 IFT74Q96LB3 600 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 MYADMQ96S97 322 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 CLSTN3Q9BQT9 956 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 RHOBTB2Q9BYZ6 727 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 NT5C3AQ9H0P0 336 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 KCNK12Q9HB15 430 aa19.84■□□□□ 0.77
H3F3B-209ENST00000589949 SF3B1O75533 1304 aaKnown RBP eCLIP19.83■□□□□ 0.774e-7■■■■■ 28.9
H3F3B-209ENST00000589949 HIP1RO75146 1068 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 EFNA5P52803 228 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 PTPN5P54829 565 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 PEX3P56589 373 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 FAM171A1Q5VUB5 890 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 C1orf186Q6ZWK4 172 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 ACSF2Q96CM8 615 aaPredicted RBP19.83■□□□□ 0.77
H3F3B-209ENST00000589949 PPP1R10Q96QC0 940 aaKnown RBP19.83■□□□□ 0.77
H3F3B-209ENST00000589949 ADPGKQ9BRR6 497 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 PTPRHQ9HD43 1115 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.83■□□□□ 0.77
H3F3B-209ENST00000589949 FAM86C1Q9NVL1 165 aa19.83■□□□□ 0.77
H3F3B-209ENST00000589949 MTCL1Q9Y4B5 1905 aaKnown RBP19.82■□□□□ 0.76
H3F3B-209ENST00000589949 CLUHO75153 1309 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 ABLIM1O14639 778 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 MEFVO15553 781 aaPredicted RBP19.82■□□□□ 0.76
H3F3B-209ENST00000589949 NARSO43776 548 aaKnown RBP19.82■□□□□ 0.76
H3F3B-209ENST00000589949 PRPHP41219 470 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 RABEP1Q15276 862 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 DCAF4L1Q3SXM0 396 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 RINT1Q6NUQ1 792 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 CEP57Q86XR8 500 aa19.82■□□□□ 0.76
H3F3B-209ENST00000589949 ST13P5Q8NFI4 369 aaPredicted RBP19.82■□□□□ 0.76
H3F3B-209ENST00000589949 HDAC7Q8WUI4 952 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms