RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 MAN1C1Q9NR34 630 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 LIMD1Q9UGP4 676 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
VAT1-206ENST00000589709 PTGESO14684 152 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 TADA2AO75478 443 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 THP07101 528 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 AVPR2P30518 371 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 NUBP1P53384 320 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 NBR1Q14596 966 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 DCAF4L1Q3SXM0 396 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 IER5LQ5T953 404 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
VAT1-206ENST00000589709 DDX19AQ9NUU7 478 aaKnown RBP13.47□□□□□ -0.25
VAT1-206ENST00000589709 SNTG2Q9NY99 539 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 DNM3Q9UQ16 869 aa13.47□□□□□ -0.25
VAT1-206ENST00000589709 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.25
VAT1-206ENST00000589709 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 K7ERI5 159 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 ST18O60284 1047 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 RECQL4O94761 1208 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 EDN1P05305 212 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 PTPN5P54829 565 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
VAT1-206ENST00000589709 NAB2Q15742 525 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 RILPL1Q5EBL4 403 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 EEF1DP3Q658K8 133 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 APBB1IPQ7Z5R6 666 aaPredicted RBP13.46□□□□□ -0.25
VAT1-206ENST00000589709 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 PRSS33Q8NF86 280 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
VAT1-206ENST00000589709 PAAF1Q9BRP4 392 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
VAT1-206ENST00000589709 TNFSF13BQ9Y275 285 aa13.46□□□□□ -0.25
VAT1-206ENST00000589709 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.25
VAT1-206ENST00000589709 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 TGM5O43548 720 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 ASGR2P07307 311 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 VCPP55072 806 aaKnown RBP13.45□□□□□ -0.26
VAT1-206ENST00000589709 IL17AQ16552 155 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 ATF7IP2Q5U623 682 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 ALYREFQ86V81 257 aaKnown RBP13.45□□□□□ -0.26
VAT1-206ENST00000589709 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 PIK3R5Q8WYR1 880 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 STAMQ92783 540 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 ZNF707Q96C28 371 aaPredicted RBP13.45□□□□□ -0.26
VAT1-206ENST00000589709 B3GALT6Q96L58 329 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 KIFC3Q9BVG8 833 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 TMEM134Q9H6X4 195 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 POLD4Q9HCU8 107 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 IGSF9Q9P2J2 1179 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 KCNG1Q9UIX4 513 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
VAT1-206ENST00000589709 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
VAT1-206ENST00000589709 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 E9PMD0 336 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 RFPL2O75678 378 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 KIF4AO95239 1232 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
VAT1-206ENST00000589709 LIG1P18858 919 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 NPTX2P47972 431 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 MRE11P49959 708 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 TCF15Q12870 199 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 TDGQ13569 410 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 FAM171A1Q5VUB5 890 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 RINT1Q6NUQ1 792 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 C1orf186Q6ZWK4 172 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 DAW1Q8N136 415 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
VAT1-206ENST00000589709 SMG7Q92540 1137 aaKnown RBP13.44□□□□□ -0.26
VAT1-206ENST00000589709 TMX3Q96JJ7 454 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 NTPCRQ9BSD7 190 aaKnown RBP13.44□□□□□ -0.26
VAT1-206ENST00000589709 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
VAT1-206ENST00000589709 TIPINQ9BVW5 301 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 CXCL16Q9H2A7 254 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 PTPRHQ9HD43 1115 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 EPS15L1Q9UBC2 864 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
VAT1-206ENST00000589709 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms