RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PLK5Q496M5 336 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PABPC1LQ4VXU2 614 aaKnown RBP6.87□□□□□ -1.31
VPS25-204ENST00000589577 FAM78AQ5JUQ0 283 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PPM1LQ5SGD2 360 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 UBXN11Q5T124 520 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 DAB2IPQ5VWQ8 1189 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 FUT10Q6P4F1 479 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PKN3Q6P5Z2 889 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 VITQ6UXI7 678 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 MRPL10Q7Z7H8 261 aaKnown RBP6.87□□□□□ -1.31
VPS25-204ENST00000589577 CKAP2LQ8IYA6 745 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 GPR65Q8IYL9 337 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 SLC7A14Q8TBB6 771 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
VPS25-204ENST00000589577 EVI5LQ96CN4 794 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 SCLT1Q96NL6 688 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 CLSTN3Q9BQT9 956 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
VPS25-204ENST00000589577 BRD9Q9H8M2 597 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PSTPIP2Q9H939 334 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS25-204ENST00000589577 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PTPRDP23468 1912 aa6.87□□□□□ -1.31
VPS25-204ENST00000589577 PI4KAP42356 2102 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 TEP1Q99973 2627 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 ARID2Q68CP9 1835 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 A0A087WZ62 844 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 SPAARA0A1B0GVQ0 90 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 BCLAF3A2AJT9 711 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 EIF4E1BA6NMX2 242 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 KIF5BP33176 963 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 SOX9P48436 509 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 SCAPQ12770 1279 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 USP41Q3LFD5 358 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 CEP55Q53EZ4 464 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 LIN9Q5TKA1 542 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 MIS18BP1Q6P0N0 1132 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 PLEKHM2Q8IWE5 1019 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 ZNF710Q8N1W2 664 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 RABGGTAQ92696 567 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 PGBD1Q96JS3 809 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 FAM193BQ96PV7 902 aaPredicted RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 CEP89Q96ST8 783 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 HNRNPABQ99729 332 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 FDXACB1Q9BRP7 624 aaPredicted RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 MIOSQ9NXC5 875 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 KANSL3Q9P2N6 904 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 CACNG4Q9UBN1 327 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 CEP131Q9UPN4 1083 aa6.86□□□□□ -1.31
VPS25-204ENST00000589577 MRPS23Q9Y3D9 190 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 U3KPZ7 1027 aaPredicted RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 URB1O60287 2271 aaKnown RBP6.86□□□□□ -1.31
VPS25-204ENST00000589577 NUP210Q8TEM1 1887 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 CNTNAP2Q9UHC6 1331 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 IGLV3-22A0A075B6J6 115 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 ARL5CA6NH57 179 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 SPDYE3A6NKU9 549 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 PATE3B3GLJ2 98 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 FAM86B1E9PN63 330 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 XYLBO75191 536 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 AKAP3O75969 853 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CAVIN2O95810 425 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RHOP08100 348 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 FAM86B2P0C5J1 330 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CCDC192P0DO97 292 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 SFPQP23246 707 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS25-204ENST00000589577 TMOD1P28289 359 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 GDI1P31150 447 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 HOXA11P31270 313 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 MLH1P40692 756 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CCR2P41597 374 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 FAM193AP78312 1265 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CREB5Q02930 508 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CCINQ13939 588 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 LRRC32Q14392 662 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 TARBP2Q15633 366 aaKnown RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 UGCGQ16739 394 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 BMP2KLQ5H9B9 411 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 PRSS36Q5K4E3 855 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 TTC22Q5TAA0 569 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RAB44Q7Z6P3 723 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 PIP4P1Q86T03 277 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 CHCHD4Q8N4Q1 142 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 SMG8Q8ND04 991 aaKnown RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 GSTCDQ8NEC7 633 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 LNX1Q8TBB1 728 aaPredicted RBP6.85□□□□□ -1.31
VPS25-204ENST00000589577 IRF7Q92985 503 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
VPS25-204ENST00000589577 RSPRY1Q96DX4 576 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms