RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ARHGAP28Q9P2N2 729 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 TRIOBPQ9H2D6 2365 aa10.76□□□□□ -0.69
VPS25-202ENST00000589219 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 A0A1W2PPC1 479 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SLC15A5A6NIM6 579 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS25-202ENST00000589219 KIF4AO95239 1232 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 ATG7O95352 703 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SLC25A27O95847 323 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 ADRB2P07550 413 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 OAS2P29728 719 aaKnown RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 RFC5P40937 340 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 NOP2P46087 812 aaKnown RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 PPP3CAQ08209 521 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 DMTNQ08495 405 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 TRIM32Q13049 653 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 CASP8Q14790 479 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 EMC2Q15006 297 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 BRDTQ58F21 947 aaPredicted RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 C1orf220Q5T0J3 134 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 FAM160B1Q5W0V3 765 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 KRT39Q6A163 491 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SWSAP1Q6NVH7 229 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 C8orf74Q6P047 294 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SLFN11Q7Z7L1 901 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 GPD1LQ8N335 351 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SELENOOQ9BVL4 669 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 POLR3FQ9H1D9 316 aaPredicted RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 XPNPEP1Q9NQW7 623 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 ZNF302Q9NR11 478 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 PDLIM7Q9NR12 457 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SUCLA2Q9P2R7 463 aaPredicted RBP10.75□□□□□ -0.69
VPS25-202ENST00000589219 OGDHLQ9ULD0 1010 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 COQ4Q9Y3A0 265 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 ALPK3Q96L96 1907 aa10.75□□□□□ -0.69
VPS25-202ENST00000589219 SIP14410 1827 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 IGKV6D-21A0A0A0MT36 114 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 TISP43B9A030 160 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 HNRNPDLO14979 420 aaKnown RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 PEX10O60683 326 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 PIGRP01833 764 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 TNFAIP3P21580 790 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 CNGA1P29973 690 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 GCLMP48507 274 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 GPC3P51654 580 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 POLGP54098 1239 aaPredicted RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 GALCP54803 685 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 MFAP3P55082 362 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 HADHBP55084 474 aaKnown RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 DLG4P78352 724 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 CYP24A1Q07973 514 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 CACNB2Q08289 660 aaPredicted RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 NNTQ13423 1086 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 NEDD9Q14511 834 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 CLUL1Q15846 466 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 ARHGAP44Q17R89 818 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 MFSD14CQ5VZR4 134 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 PHLDB3Q6NSJ2 640 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 ENOSF1Q7L5Y1 443 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 GLYCTKQ8IVS8 523 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 RDH13Q8NBN7 331 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 BSNDQ8WZ55 320 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 BICD1Q96G01 975 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 FAM167AQ96KS9 214 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 MFSD14AQ96MC6 490 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 NT5C1BQ96P26 610 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 AGPAT1Q99943 283 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 SPATC1LQ9H0A9 340 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 TMEM117Q9H0C3 514 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 C11orf49Q9H6J7 331 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 STIM2Q9P246 746 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 DIS3Q9Y2L1 958 aaKnown RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 MAFBQ9Y5Q3 323 aaPredicted RBP10.74□□□□□ -0.69
VPS25-202ENST00000589219 SYNGAP1Q96PV0 1343 aa10.74□□□□□ -0.69
VPS25-202ENST00000589219 ANKRD62A6NC57 917 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 LRRIQ3A6PVS8 624 aaPredicted RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 ANKRD63C9JTQ0 380 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 STRNO43815 780 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 LRRN2O75325 713 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 CNMDO75829 334 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 UBA1P22314 1058 aaKnown RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 ADSSP30520 456 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 NAMPTP43490 491 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
VPS25-202ENST00000589219 AARSP49588 968 aaKnown RBP eCLIP10.73□□□□□ -0.69
VPS25-202ENST00000589219 EPHB4P54760 987 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 STRN3Q13033 797 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 TERF2Q15554 542 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 MTERF2Q49AM1 385 aa10.73□□□□□ -0.69
VPS25-202ENST00000589219 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms