RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
ERCC1-209ENST00000589214 TIPINQ9BVW5 301 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 ARHGAP28Q9P2N2 729 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 CACNG4Q9UBN1 327 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 PRKAG3Q9UGI9 489 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
ERCC1-209ENST00000589214 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-209ENST00000589214 A0A087X0B3 334 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 PPP6R2O75170 966 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 NR1I2O75469 434 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 URODP06132 367 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 DDIT3P35638 169 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 TXLNAP40222 546 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 ZNF568Q3ZCX4 644 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 PDILTQ8N807 584 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
ERCC1-209ENST00000589214 RABGGTAQ92696 567 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 CASP10Q92851 521 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 MRPL4Q9BYD3 311 aaKnown RBP16.71■□□□□ 0.27
ERCC1-209ENST00000589214 C17orf75Q9HAS0 396 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 TNFSF13BQ9Y275 285 aa16.71■□□□□ 0.27
ERCC1-209ENST00000589214 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 C2CD2LO14523 706 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 PTGESO14684 152 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 CUTAO60888 179 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
ERCC1-209ENST00000589214 PLS3P13797 630 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 GIT2Q14161 759 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 TMEM184AQ6ZMB5 413 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 POP1Q99575 1024 aaKnown RBP16.7■□□□□ 0.26
ERCC1-209ENST00000589214 REEP2Q9BRK0 252 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
ERCC1-209ENST00000589214 CDT1Q9H211 546 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 TMEM134Q9H6X4 195 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 KCND2Q9NZV8 630 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 STK39Q9UEW8 545 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
ERCC1-209ENST00000589214 TRIP11Q15643 1979 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 SOD2P04179 222 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 HARSP12081 509 aaKnown RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 EPCAMP16422 314 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 ME1P48163 572 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 CEP120Q8N960 986 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 HASPINQ8TF76 798 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 PAAF1Q9BRP4 392 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 COLEC11Q9BWP8 271 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 MRPL17Q9NRX2 175 aaKnown RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
ERCC1-209ENST00000589214 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
ERCC1-209ENST00000589214 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 STAT6P42226 847 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 GLUD2P49448 558 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 SMTNP53814 917 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 OSTNP61366 133 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 STRN3Q13033 797 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 TUSC3Q13454 348 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 ATL3Q6DD88 541 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 CCDC73Q6ZRK6 1079 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 DYMQ7RTS9 669 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 TAS1R1Q7RTX1 841 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 RNF168Q8IYW5 571 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-209ENST00000589214 MYCT1Q8N699 235 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 SPIRE2Q8WWL2 714 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 STAMQ92783 540 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 ANKFY1Q9P2R3 1169 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
ERCC1-209ENST00000589214 MYMKA6NI61 221 aa16.67■□□□□ 0.26
ERCC1-209ENST00000589214 FAM13AO94988 1023 aa16.67■□□□□ 0.26
ERCC1-209ENST00000589214 THP07101 528 aa16.67■□□□□ 0.26
ERCC1-209ENST00000589214 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
ERCC1-209ENST00000589214 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
ERCC1-209ENST00000589214 HOXB8P17481 243 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-209ENST00000589214 KLRC2P26717 231 aa16.67■□□□□ 0.26
ERCC1-209ENST00000589214 GRM5P41594 1212 aa16.67■□□□□ 0.26
ERCC1-209ENST00000589214 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms