RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 PPIGQ13427 754 aaKnown RBP eCLIP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 GPNMBQ14956 572 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 TARBP2Q15633 366 aaKnown RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 CCDC40Q4G0X9 1142 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 C9orf50Q5SZB4 431 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 PAPD7Q5XG87 772 aaKnown RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 EFCAB12Q6NXP0 572 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 TAF2Q6P1X5 1199 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 TRAF7Q6Q0C0 670 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 ZNF720Q7Z2F6 126 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 SRGAP1Q7Z6B7 1085 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 LRRC71Q8N4P6 559 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 TRIM58Q8NG06 486 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 PIGOQ8TEQ8 1089 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 RUBCNQ92622 972 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 HVCN1Q96D96 273 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 VWCEQ96DN2 955 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 CEP170P1Q96L14 293 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 CEP89Q96ST8 783 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 PPP1R16BQ96T49 567 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 STRA6Q9BX79 667 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 BHMT2Q9H2M3 363 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 SUGCTQ9HAC7 445 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 ANKEF1Q9NU02 776 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 AGPAT5Q9NUQ2 364 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 OGFRQ9NZT2 677 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 ARMCX3Q9UH62 379 aaPredicted RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 WDR81Q562E7 1941 aa9.48□□□□□ -0.89
KDM4B-207ENST00000588961 MYH9P35579 1960 aaKnown RBP9.48□□□□□ -0.89
KDM4B-207ENST00000588961 SMIM35A0A1B0GVV1 85 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 RNF225M0QZC1 329 aaPredicted RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 PES1O00541 588 aaKnown RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 NBNO60934 754 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 FAM13AO94988 1023 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CHRNA1P02708 482 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 VTNP04004 478 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 SERPING1P05155 500 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 SSBP05455 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 BMP8BP34820 402 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 PSMC2P35998 433 aaKnown RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 DRP2Q13474 957 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 BMS1Q14692 1282 aaKnown RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 BRD3Q15059 726 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 SHHQ15465 462 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 ASTE1Q2TB18 679 aaPredicted RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 XKR9Q5GH70 373 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 ZNF569Q5MCW4 686 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 TMEM240Q5SV17 173 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 IQCEQ6IPM2 695 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 ZNF365Q70YC5 407 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 OTUD6AQ7L8S5 288 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CACNA2D4Q7Z3S7 1137 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 KIAA0319LQ8IZA0 1049 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 BAP1Q92560 729 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 GOLGA1Q92805 767 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 ZNF668Q96K58 619 aaPredicted RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 WDR24Q96S15 920 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CHP1Q99653 195 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.896e-8■■□□□ 12.3
KDM4B-207ENST00000588961 REEP2Q9BRK0 252 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 PRO3102Q9H379 93 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CDHR5Q9HBB8 845 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 IL23AQ9NPF7 189 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CYP26B1Q9NR63 512 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 DMAC2Q9NW81 257 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
KDM4B-207ENST00000588961 SCN5AQ14524 2016 aa9.46□□□□□ -0.89
KDM4B-207ENST00000588961 KAT6AQ92794 2004 aa9.46□□□□□ -0.89
KDM4B-207ENST00000588961 H0YCG3 227 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 MAGEB2O15479 319 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
KDM4B-207ENST00000588961 FGBP02675 491 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 AFPP02771 609 aaKnown RBP9.46□□□□□ -0.9
KDM4B-207ENST00000588961 NR2F2P24468 414 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 MRPS6P82932 125 aaKnown RBP9.46□□□□□ -0.9
KDM4B-207ENST00000588961 CKAP4Q07065 602 aaKnown RBP9.46□□□□□ -0.9
KDM4B-207ENST00000588961 GOLGA8FQ08AF8 430 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 MGAT3Q09327 533 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 GOLGA8DPQ0D2H9 430 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 KCNMA1Q12791 1236 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 TCTN1Q2MV58 587 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 FAM26DQ5JW98 314 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 CCDC122Q5T0U0 273 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 SFMBT2Q5VUG0 894 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
KDM4B-207ENST00000588961 OTOP2Q7RTS6 562 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms