RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
VMP1-208ENST00000588617 LILRA2Q8N149 483 aa9.11□□□□□ -0.95
VMP1-208ENST00000588617 TXLNBQ8N3L3 684 aa9.11□□□□□ -0.95
VMP1-208ENST00000588617 CCHCR1Q8TD31 782 aa9.11□□□□□ -0.95
VMP1-208ENST00000588617 HOXB13Q92826 284 aaPredicted RBP9.11□□□□□ -0.95
VMP1-208ENST00000588617 SUCLG2Q96I99 432 aa9.11□□□□□ -0.95
VMP1-208ENST00000588617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.11□□□□□ -0.95
VMP1-208ENST00000588617 PRAMEF4O60810 478 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 PHF2O75151 1096 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 MPOP05164 745 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 PYGLP06737 847 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 H2AFB2P0C5Z0 115 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 MALP21145 153 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 SLC6A9P48067 706 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 ALDH9A1P49189 494 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 IL13RA1P78552 427 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 CD83Q01151 205 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 CD69Q07108 199 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 MAP3K12Q12852 859 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 RAB3GAP1Q15042 981 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 SLC35G1Q2M3R5 365 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 CR1LQ2VPA4 569 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 KANK2Q63ZY3 851 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 ABHD15Q6UXT9 468 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 MAATS1Q7Z4T9 603 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 MSL3Q8N5Y2 521 aaKnown RBP9.1□□□□□ -0.95
VMP1-208ENST00000588617 CELF5Q8N6W0 485 aaKnown RBP9.1□□□□□ -0.95
VMP1-208ENST00000588617 ATP11CQ8NB49 1132 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 IL17REQ8NFR9 667 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 SACM1LQ9NTJ5 587 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 PIH1D1Q9NWS0 290 aaKnown RBP9.1□□□□□ -0.95
VMP1-208ENST00000588617 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 DNAI1Q9UI46 699 aa9.1□□□□□ -0.95
VMP1-208ENST00000588617 A0A1W2PPC4 97 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 A0A1W2PR48 441 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 LY86O95711 162 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 LDHCP07864 332 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 LTA4HP09960 611 aaKnown RBP9.09□□□□□ -0.95
VMP1-208ENST00000588617 DHRS4L1P0CG22 281 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 TNFAIP3P21580 790 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 PDIA3P30101 505 aaKnown RBP9.09□□□□□ -0.95
VMP1-208ENST00000588617 GLRBP48167 497 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 MEF2AQ02078 507 aaPredicted RBP9.09□□□□□ -0.95
VMP1-208ENST00000588617 Q6ZVL8 140 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 AMIGO3Q86WK7 504 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 BRIX1Q8TDN6 353 aaKnown RBP9.09□□□□□ -0.95
VMP1-208ENST00000588617 TRAPPC12Q8WVT3 735 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 MSLNLQ96KJ4 702 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 HAPLN2Q9GZV7 340 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 WDCPQ9H6R7 721 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 GJB4Q9NTQ9 266 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
VMP1-208ENST00000588617 ARHGAP20Q9P2F6 1191 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 GRHPRQ9UBQ7 328 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 SIK3Q9Y2K2 1263 aa9.09□□□□□ -0.95
VMP1-208ENST00000588617 PLA2G6O60733 806 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 TGFB1P01137 390 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 RAC2P15153 192 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 EEF1GP26641 437 aaKnown RBP9.08□□□□□ -0.96
VMP1-208ENST00000588617 ERVFRD-1P60508 538 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 TLE1Q04724 770 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 STILQ15468 1287 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 C3orf38Q5JPI3 329 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
VMP1-208ENST00000588617 CD300LDQ6UXZ3 194 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 CYP26C1Q6V0L0 522 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 ATG16L2Q8NAA4 619 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 MYLIPQ8WY64 445 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 ALG3Q92685 438 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 MRGPRX1Q96LB2 322 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 UHRF1Q96T88 793 aaPredicted RBP9.08□□□□□ -0.96
VMP1-208ENST00000588617 RMDN3Q96TC7 470 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 TACO1Q9BSH4 297 aaKnown RBP9.08□□□□□ -0.96
VMP1-208ENST00000588617 BRIP1Q9BX63 1249 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 ITM2CQ9NQX7 267 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 LRFN1Q9P244 771 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 AFF4Q9UHB7 1163 aaKnown RBP9.08□□□□□ -0.96
VMP1-208ENST00000588617 RPS6KL1Q9Y6S9 549 aa9.08□□□□□ -0.96
VMP1-208ENST00000588617 MYBBP1AQ9BQG0 1328 aaKnown RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 MAFO75444 373 aaPredicted RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 EN2P19622 333 aaPredicted RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 PRKG1Q13976 671 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 UBE3CQ15386 1083 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 MAN2A1Q16706 1144 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 PFKFB4Q16877 469 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 RSPO4Q2I0M5 234 aaPredicted RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 ZACNQ401N2 412 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 FLYWCH1Q4VC44 716 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 FKBP15Q5T1M5 1219 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 GRAMD4Q6IC98 578 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 ZC3H18Q86VM9 953 aaKnown RBP9.07□□□□□ -0.96
VMP1-208ENST00000588617 CACNA2D3Q8IZS8 1091 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 FAM26EQ8N5C1 309 aa9.07□□□□□ -0.96
VMP1-208ENST00000588617 IFI44Q8TCB0 444 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms