RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GRM6O15303 877 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 GADD45BO75293 160 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-207ENST00000588542 GCNT3O95395 438 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 ITGB1P05556 798 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 GRM5P41594 1212 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 LIG4P49917 911 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 NOLC1Q14978 699 aaKnown RBP eCLIP22.12■■□□□ 1.13
DDX39A-207ENST00000588542 L1TD1Q5T7N2 865 aaKnown RBP22.12■■□□□ 1.13
DDX39A-207ENST00000588542 KCNT2Q6UVM3 1135 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 TMEM87AQ8NBN3 555 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 AAASQ9NRG9 546 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 KANSL3Q9P2N6 904 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 DNAJB4Q9UDY4 337 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 PLAGL2Q9UPG8 496 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 PCDHB12Q9Y5F1 795 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 MYO7AQ13402 2215 aa22.12■■□□□ 1.13
DDX39A-207ENST00000588542 PVALEFA0A1B0GWK0 134 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 TISP43B9A030 160 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 PTGESO14684 152 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 HNRNPDLO14979 420 aaKnown RBP22.11■■□□□ 1.13
DDX39A-207ENST00000588542 CLDN3O15551 220 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 PRR29P0C7W0 189 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 IGFBP4P22692 258 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 BCAR1P56945 870 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 RNASELQ05823 741 aaKnown RBP22.11■■□□□ 1.13
DDX39A-207ENST00000588542 CSPP1Q1MSJ5 1256 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 ZNF558Q96NG5 402 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 GBP3Q9H0R5 595 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 ALG13Q9NP73 1137 aaKnown RBP22.11■■□□□ 1.13
DDX39A-207ENST00000588542 PCDHB13Q9Y5F0 798 aa22.11■■□□□ 1.13
DDX39A-207ENST00000588542 PRUNE2Q8WUY3 3088 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 MEFVO15553 781 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-207ENST00000588542 GTPBP6O43824 516 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-207ENST00000588542 ZC3H11AO75152 810 aaKnown RBP eCLIP22.1■■□□□ 1.13
DDX39A-207ENST00000588542 HARSP12081 509 aaKnown RBP22.1■■□□□ 1.13
DDX39A-207ENST00000588542 DNAJB1P25685 340 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 OSTNP61366 133 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 ALCAMQ13740 583 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 SEZ6Q53EL9 994 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 FAM26FQ5R3K3 315 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 EPM2AIP1Q7L775 607 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-207ENST00000588542 THNSL1Q8IYQ7 743 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 SPPL3Q8TCT6 385 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 ACCSQ96QU6 501 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 LMCD1Q9NZU5 365 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 STYXL1Q9Y6J8 313 aa22.1■■□□□ 1.13
DDX39A-207ENST00000588542 A0A0B4J269 797 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 NT5C1B-RDH14C9J2C7 533 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 FAM189A1O60320 539 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 FGF18O76093 207 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 PRPF6O94906 941 aaKnown RBP22.09■■□□□ 1.13
DDX39A-207ENST00000588542 MYL1P05976 194 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 GALTP07902 379 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 SLC11A1P49279 550 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 FAM160A1Q05DH4 1040 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 DSC1Q08554 894 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 CAMK1Q14012 370 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 NAB2Q15742 525 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 ALKAL1Q6UXT8 129 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 COLGALT2Q8IYK4 626 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 SLC39A11Q8N1S5 342 aa22.09■■□□□ 1.13
DDX39A-207ENST00000588542 CCDC94Q9BW85 323 aaPredicted RBP22.09■■□□□ 1.13
DDX39A-207ENST00000588542 SLC34A2O95436 690 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 HOXD13P35453 343 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 MATR3P43243 847 aaKnown RBP eCLIP22.08■■□□□ 1.13
DDX39A-207ENST00000588542 PLCB3Q01970 1234 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 DPYDQ12882 1025 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 GRIK3Q13003 919 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 XKR4Q5GH76 650 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 TMEM173Q86WV6 379 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-207ENST00000588542 MRPL38Q96DV4 380 aaKnown RBP22.08■■□□□ 1.13
DDX39A-207ENST00000588542 ACAP3Q96P50 834 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 RPS6KC1Q96S38 1066 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 SPG21Q9NZD8 308 aa22.08■■□□□ 1.13
DDX39A-207ENST00000588542 SPTBN5Q9NRC6 3674 aaKnown RBP22.08■■□□□ 1.12
DDX39A-207ENST00000588542 EIF3DO15371 548 aaKnown RBP eCLIP22.07■■□□□ 1.12
DDX39A-207ENST00000588542 NR1I2O75469 434 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 ADSSP30520 456 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 ALDH7A1P49419 539 aaKnown RBP22.07■■□□□ 1.12
DDX39A-207ENST00000588542 KMT5BQ4FZB7 885 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 ZBTB41Q5SVQ8 909 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 CLEC17AQ6ZS10 378 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 ZNF507Q8TCN5 953 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 BCL7CQ8WUZ0 217 aaPredicted RBP22.07■■□□□ 1.12
DDX39A-207ENST00000588542 POF1BQ8WVV4 589 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 SNX27Q96L92 541 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 FAM193BQ96PV7 902 aaPredicted RBP22.07■■□□□ 1.12
DDX39A-207ENST00000588542 TMEM175Q9BSA9 504 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 LMAN2LQ9H0V9 348 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 SLC39A2Q9NP94 309 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 EXOC7Q9UPT5 735 aa22.07■■□□□ 1.12
DDX39A-207ENST00000588542 OGTO15294 1046 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 RPN1P04843 607 aaKnown RBP22.06■■□□□ 1.12
DDX39A-207ENST00000588542 PPM1AP35813 382 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 TNFSF9P41273 254 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 YARSP54577 528 aaKnown RBP22.06■■□□□ 1.12
DDX39A-207ENST00000588542 SLC10A6Q3KNW5 377 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 KANK3Q6NY19 840 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 MAFAQ8NHW3 353 aaPredicted RBP22.06■■□□□ 1.12
DDX39A-207ENST00000588542 SCFD1Q8WVM8 642 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms