RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 SEMA4AQ9H3S1 761 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 RPAP3Q9H6T3 665 aaPredicted RBP23.12■■□□□ 1.29
TMC6-209ENST00000588087 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.12■■□□□ 1.296e-8■■□□□ 13.8
TMC6-209ENST00000588087 CAPN7Q9Y6W3 813 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 SRCAPQ6ZRS2 3230 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 MTA2O94776 668 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 SMTNP53814 917 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 CDR2Q01850 454 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 SLC29A2Q14542 456 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 LMBRD2Q68DH5 695 aaPredicted RBP23.12■■□□□ 1.29
TMC6-209ENST00000588087 SV2AQ7L0J3 742 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 SLC13A5Q86YT5 568 aaPredicted RBP23.12■■□□□ 1.29
TMC6-209ENST00000588087 CCDC105Q8IYK2 499 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 MTMR14Q8NCE2 650 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 TLCD1Q96CP7 247 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 ZBED3Q96IU2 234 aaPredicted RBP23.12■■□□□ 1.29
TMC6-209ENST00000588087 CEP170P1Q96L14 293 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 KIAA1683Q9H0B3 1180 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 MYOZ2Q9NPC6 264 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 RAB20Q9NX57 234 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 GABBR1Q9UBS5 961 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 PCDHA3Q9Y5H8 950 aa23.12■■□□□ 1.29
TMC6-209ENST00000588087 ZNF862O60290 1169 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 BAATQ14032 418 aaPredicted RBP23.11■■□□□ 1.29
TMC6-209ENST00000588087 FBXL13Q8NEE6 735 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 ATG4CQ96DT6 458 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 PCYOX1Q9UHG3 505 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 CLDN3O15551 220 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 HSPA6P17066 643 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 GPC3P51654 580 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 SIX1Q15475 284 aaPredicted RBP23.11■■□□□ 1.29
TMC6-209ENST00000588087 CLUL1Q15846 466 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 C2CD6Q53TS8 623 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 LLGL2Q6P1M3 1020 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 AGBL3Q8NEM8 1001 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 DDX1Q92499 740 aaKnown RBP23.11■■□□□ 1.29
TMC6-209ENST00000588087 AZI2Q9H6S1 392 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 ANKEF1Q9NU02 776 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 DDX20Q9UHI6 824 aaKnown RBP23.11■■□□□ 1.29
TMC6-209ENST00000588087 GTF3C4Q9UKN8 822 aa23.11■■□□□ 1.29
TMC6-209ENST00000588087 PMM2O15305 246 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 COILP38432 576 aaPredicted RBP23.1■■□□□ 1.29
TMC6-209ENST00000588087 EIF3BP55884 814 aaKnown RBP23.1■■□□□ 1.29
TMC6-209ENST00000588087 KRT76Q01546 638 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 CYP24A1Q07973 514 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 ZNF772Q68DY9 489 aaPredicted RBP23.1■■□□□ 1.29
TMC6-209ENST00000588087 MICALCLQ6ZW33 695 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 PAGR1Q9BTK6 254 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 TIPINQ9BVW5 301 aa23.1■■□□□ 1.29
TMC6-209ENST00000588087 SLCO1A2P46721 670 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 SNRPFP62306 86 aaKnown RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 EN1Q05925 392 aaPredicted RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 HOOK3Q86VS8 718 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 TEPSINQ96N21 525 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 FAM213AQ9BRX8 229 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 MOV10L1Q9BXT6 1211 aaKnown RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 COQ4Q9Y3A0 265 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 HNRNPDLO14979 420 aaKnown RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 NUDT17P0C025 328 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 DRG2P55039 364 aaKnown RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 IFI35P80217 286 aaPredicted RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 NLRX1Q86UT6 975 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 CCDC25Q86WR0 208 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 C1orf54Q8WWF1 131 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 SELENOSQ9BQE4 189 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 RNF146Q9NTX7 359 aa23.09■■□□□ 1.29
TMC6-209ENST00000588087 ATXN2Q99700 1313 aaKnown RBP23.09■■□□□ 1.29
TMC6-209ENST00000588087 GRIN3BO60391 1043 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 SFNP31947 248 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 SNX1Q13596 522 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 SPATS2Q86XZ4 545 aaKnown RBP23.08■■□□□ 1.29
TMC6-209ENST00000588087 EPS8L3Q8TE67 593 aaKnown RBP23.08■■□□□ 1.29
TMC6-209ENST00000588087 BICD1Q96G01 975 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 STK32BQ9NY57 414 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 ZBED4O75132 1171 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 KCNA3P22001 575 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 RWDD2BP57060 319 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 SF3A3Q12874 501 aaKnown RBP eCLIP23.08■■□□□ 1.293e-8■■■■□ 20.3
TMC6-209ENST00000588087 DAB2IPQ5VWQ8 1189 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
TMC6-209ENST00000588087 MFSD14AQ96MC6 490 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 ANAPC7Q9UJX3 599 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 PCDHA10Q9Y5I2 948 aa23.08■■□□□ 1.29
TMC6-209ENST00000588087 SRRM3A6NNA2 597 aaPredicted RBP23.07■■□□□ 1.28
TMC6-209ENST00000588087 ACAD10Q6JQN1 1059 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 SWSAP1Q6NVH7 229 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 PSPC1Q8WXF1 523 aaKnown RBP23.07■■□□□ 1.28
TMC6-209ENST00000588087 VWA5AO00534 786 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 PODXLO00592 558 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 GGPS1O95749 300 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 PAEPP09466 180 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 CYP1B1Q16678 543 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 CLEC16AQ2KHT3 1053 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 SPDYCQ5MJ68 293 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 ATG4AQ8WYN0 398 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 MTRF1LQ9UGC7 380 aaKnown RBP23.07■■□□□ 1.28
TMC6-209ENST00000588087 PSME4Q14997 1843 aa23.07■■□□□ 1.28
TMC6-209ENST00000588087 SSTR3P32745 418 aaPredicted RBP23.06■■□□□ 1.28
TMC6-209ENST00000588087 FNTAP49354 379 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms