RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ADAM28Q9UKQ2 775 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 USTQ9Y2C2 406 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 SSX2IPQ9Y2D8 614 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 ARID2Q68CP9 1835 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 CCDC195A0A1B0GUA6 201 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 E9PMD0 336 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 PDIA5Q14554 519 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
VMP1-206ENST00000587945 PPP2R5AQ15172 486 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 USP41Q3LFD5 358 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 NT5DC1Q5TFE4 455 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 CCDC149Q6ZUS6 474 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 IGSF22Q8N9C0 903 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 IFT74Q96LB3 600 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
VMP1-206ENST00000587945 WDFY4Q6ZS81 3184 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 TUSC3Q13454 348 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 RABEP1Q15276 862 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 PRSS55Q6UWB4 352 aaPredicted RBP15.81■□□□□ 0.12
VMP1-206ENST00000587945 C15orf39Q6ZRI6 1047 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 UBALD2Q8IYN6 164 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 PLCD3Q8N3E9 789 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 CMASQ8NFW8 434 aaPredicted RBP15.81■□□□□ 0.12
VMP1-206ENST00000587945 KIFAP3Q92845 792 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 ADPGKQ9BRR6 497 aa15.81■□□□□ 0.12
VMP1-206ENST00000587945 ZMYM2Q9UBW7 1377 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 TGM5O43548 720 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 KIF4AO95239 1232 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 CD2BP2O95400 341 aaKnown RBP15.8■□□□□ 0.12
VMP1-206ENST00000587945 THP07101 528 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 IGFBP6P24592 240 aaPredicted RBP15.8■□□□□ 0.12
VMP1-206ENST00000587945 AVPR2P30518 371 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 MRE11P49959 708 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 PEX3P56589 373 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 NAB2Q15742 525 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 RTP2Q5QGT7 225 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 ATF7IP2Q5U623 682 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 KCNK18Q7Z418 384 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 DAW1Q8N136 415 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 ACSF2Q96CM8 615 aaPredicted RBP15.8■□□□□ 0.12
VMP1-206ENST00000587945 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 PHOX2BQ99453 314 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
VMP1-206ENST00000587945 RUSC1Q9BVN2 902 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.8■□□□□ 0.12
VMP1-206ENST00000587945 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
VMP1-206ENST00000587945 ZNF318Q5VUA4 2279 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 SF3B1O75533 1304 aaKnown RBP eCLIP15.79■□□□□ 0.122e-7■■■■■ 143.6
VMP1-206ENST00000587945 CCDC169A6NNP5 214 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
VMP1-206ENST00000587945 HIP1RO75146 1068 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 NPTX2P47972 431 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 EFNA5P52803 228 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 TCF15Q12870 199 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
VMP1-206ENST00000587945 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 LILRA6Q6PI73 481 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 DTHD1Q6ZMT9 781 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 SMG7Q92540 1137 aaKnown RBP15.79■□□□□ 0.12
VMP1-206ENST00000587945 ZNF707Q96C28 371 aaPredicted RBP15.79■□□□□ 0.12
VMP1-206ENST00000587945 RAB34Q9BZG1 259 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
VMP1-206ENST00000587945 FNIP2Q9P278 1114 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 STK24Q9Y6E0 443 aa15.79■□□□□ 0.12
VMP1-206ENST00000587945 ZDBF2Q9HCK1 2354 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 SFI1A8K8P3 1242 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 K7ERI5 159 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 ST18O60284 1047 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 PTPN5P54829 565 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 ELMSAN1Q6PJG2 1045 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 TAS1R3Q7RTX0 852 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 GPR65Q8IYL9 337 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 CEP120Q8N960 986 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 PLIN2Q99541 437 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 TTPALQ9BTX7 342 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 NT5C3AQ9H0P0 336 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 WDR6Q9NNW5 1121 aaKnown RBP15.78■□□□□ 0.12
VMP1-206ENST00000587945 DPP7Q9UHL4 492 aa15.78■□□□□ 0.12
VMP1-206ENST00000587945 CLUHO75153 1309 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 LAD1O00515 517 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 ADAM12O43184 909 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 GJB2P29033 226 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
VMP1-206ENST00000587945 PRPHP41219 470 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 MAPK7Q13164 816 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
VMP1-206ENST00000587945 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 RSAD2Q8WXG1 361 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 MYADMQ96S97 322 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 ACO2Q99798 780 aaKnown RBP15.77■□□□□ 0.12
VMP1-206ENST00000587945 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.12
VMP1-206ENST00000587945 TARS2Q9BW92 718 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms