RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 CLUHO75153 1309 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 CFAP54Q96N23 3096 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 CASTOR2A6NHX0 329 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 TGM5O43548 720 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 NEMFO60524 1076 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 DGAT1O75907 488 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 RFX1P22670 979 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 MCM7P33993 719 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 RARRES1P49788 294 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 CLCN5P51795 746 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 DSG1Q02413 1049 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 TRIM29Q14134 588 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 ANKRD1Q15327 319 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 USP41Q3LFD5 358 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 SPECC1Q5M775 1068 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 VARS2Q5ST30 1063 aaKnown RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 FUT10Q6P4F1 479 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 SLC27A1Q6PCB7 646 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 C15orf39Q6ZRI6 1047 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 GET4Q7L5D6 327 aaPredicted RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 CEP57Q86XR8 500 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 DIS3L2Q8IYB7 885 aaKnown RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 HACE1Q8IYU2 909 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 SLC44A3Q8N4M1 653 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 NSUN7Q8NE18 718 aaKnown RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 GSTCDQ8NEC7 633 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 ZNF707Q96C28 371 aaPredicted RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 CCDC51Q96ER9 411 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 NT5C3AQ9H0P0 336 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 CXCL16Q9H2A7 254 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 RXFP1Q9HBX9 757 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 WDR6Q9NNW5 1121 aaKnown RBP7.11□□□□□ -1.27
SDF2-205ENST00000587629 CHST7Q9NS84 486 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 IGSF9Q9P2J2 1179 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 DUSP12Q9UNI6 340 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 GIT1Q9Y2X7 761 aa7.11□□□□□ -1.27
SDF2-205ENST00000587629 DMDP11532 3685 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 A0A1B0GUA9 196 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 KRBA1A5PL33 1030 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 PRR23AA6NEV1 266 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 MED24O75448 989 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 LYPLA2O95372 231 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 EFEMP2O95967 443 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 SPATA31C1P0DKV0 1188 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 AOC1P19801 751 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 IGFBP6P24592 240 aaPredicted RBP7.1□□□□□ -1.27
SDF2-205ENST00000587629 NBL1P41271 181 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 NEK4P51957 841 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 NTHL1P78549 312 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 POU5F1BQ06416 359 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 GRIK3Q13003 919 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 HSP90AA2PQ14568 343 aaPredicted RBP7.1□□□□□ -1.27
SDF2-205ENST00000587629 PCBP1Q15365 356 aaKnown RBP eCLIP7.1□□□□□ -1.27
SDF2-205ENST00000587629 ANGPT1Q15389 498 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 ZNF174Q15697 407 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 RTP2Q5QGT7 225 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 ELMSAN1Q6PJG2 1045 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 CATSPER3Q86XQ3 398 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 NOSTRINQ8IVI9 506 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 RNF168Q8IYW5 571 aaPredicted RBP7.1□□□□□ -1.27
SDF2-205ENST00000587629 DTWD2Q8NBA8 298 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 CMASQ8NFW8 434 aaPredicted RBP7.1□□□□□ -1.27
SDF2-205ENST00000587629 GPR152Q8TDT2 470 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 BSNDQ8WZ55 320 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 STAMQ92783 540 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 NKD2Q969F2 451 aaPredicted RBP7.1□□□□□ -1.27
SDF2-205ENST00000587629 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 SNTG2Q9NY99 539 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 DPP7Q9UHL4 492 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 POLIQ9UNA4 740 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 GDAQ9Y2T3 454 aa7.1□□□□□ -1.27
SDF2-205ENST00000587629 C2orf16Q68DN1 1984 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 PLXNA3P51805 1871 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 PROB1E7EW31 1015 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 PTGESO14684 152 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 CCL16O15467 120 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 ADAM12O43184 909 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 KIF4AO95239 1232 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 DCNP07585 359 aaKnown RBP7.09□□□□□ -1.27
SDF2-205ENST00000587629 LAMP2P13473 410 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 FSHRP23945 695 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 TUSC3Q13454 348 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 PRPF4BQ13523 1007 aaKnown RBP7.09□□□□□ -1.27
SDF2-205ENST00000587629 FAM171A1Q5VUB5 890 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 LILRA6Q6PI73 481 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 PADI6Q6TGC4 694 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 GRASPQ7Z6J2 395 aaPredicted RBP7.09□□□□□ -1.27
SDF2-205ENST00000587629 ZBTB8OSQ8IWT0 167 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 CCDC105Q8IYK2 499 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 ADSSL1Q8N142 457 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 DEPTORQ8TB45 409 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 KCNG4Q8TDN1 519 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 SNX27Q96L92 541 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 NACC1Q96RE7 527 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 RTP3Q9BQQ7 232 aa7.09□□□□□ -1.27
SDF2-205ENST00000587629 TTPALQ9BTX7 342 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms